Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2034 ATGGCTCGAAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCATGGATTGAACCACAAGAAAGGGGGTGGTGGTGGTGTCCTTCCGGGTATGAAAGGCAAAGGAGGGCCTGTGAAGGTTTTCCCGGGAGAGGAACCTGCAAACGGTGACAGGCCTGCTGGCGGTCTTTCACATACTGAATGTGATGCTAGCTCTGCTTGTGATGACTATAACAATGAGCAAAGATCTGAAAAAATTGCCGGGAAAGAGAAGCAAGGGATGGCTGCAAAGCATGATCTGGAGAACTCCTTGTCCTCTGGGATTAATTCAGGGGATGGAAGTCTGAATTCTGAAATTCCAGTGTATGGAGAAAATGGGACTTTACCTAGAAGTAATCAAGATCAACAGAGTATAAAGAGTAGATTGAGTTGTATACTGGATGGTTTGCATGTGAGAGGTGTGGTAGAAAGAGTAGAGTTTGCTGATAATATGATAATTAGAAGATTAAGGTTGTCAGTGTTCTCCATCATCACAGCAGTTACTGAGTGGATAACCAGGCAGGCGCCGTTGTTTGTTTCTCTGAAAACCATAACTATTAGAGCCTATGATAACATCAGAACGAAAGTTGCGCATGCATATCCTGTTGTTCTTAAGTGGCTCATGCATTTTGGAAGCATTATGCTCCTGTTATCGGTATTTTGGTTGGATTGTACCCTCCGAGGTATTGATTCATTTGTACGTATGGGTACAACATCCTTCTTCACAGTTATATGGTGCAGCATATTCTCAGTGATTAGTATGATAGGGATGCTCAAGTTTTTAGTTGTCCTGGGCCTGGCTGCCTTGATTGGATTTTTTCTTGGCCTCATGCTTGCAATTTTGGTAGTTGCAATCCTGGGAGTTGTTACGTTGTGGTTCTATGGTAGCTTTTGGACAACAGCATTTTTCATCATCCTTGGAGGATTGGCATTTATGTTAAGTCATGAACGAATGGCACTATTTATCACCACTGGGTATTCTGTTTATTGTGCTTGGCTGTACGTTGGGTGGCTTGGTTTGCTATTGGCTTTCAATTTAGCTTTCATCTCAAGTGATATTCTGATATACTTCCTCAAGAAAAACATTGATCAACAGAGTAGATCCAATCCTTTTGAGCAAACGGCTGGAATGCATGGTCAACCAGGATTTAATGATGAACCAATGCAGGGATCTTCCTCTGAAAATGGACCAGGACCATCTGCAGATCGTAATGCCGGAGTCCCTTCAACTAGTGGAGTTGATTCTGATGTAACTTCTGAAGATGAAGTTGTCCGTTTGTTGAACTGCTCTGATCACTATTCAGCACTTGGCTTGACACGGTATCAAAATATAGATGTCTCAATACTGAAGCGGGAATATAGGAAGAAGGCAATGTTGGTACATCCTGATAAAAATATGGGTAATGAAAAGGCTGCAGAAGCATTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAACTTTTGAGTGTATTTCGCAGATTTCATGATGCTTCCCGTAAGAATGGTAGGCATGGGTTCTTTTCGTCAGGATTTGCACGATCAGATGCTGATGGTGAAGACCCATTTGGTGATTCAAGACGAATAGCCTGCAAAAAGTGTGGGGGTTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCCAAGGATGGTGATGGATGGGTTGAACAATCTTCCCAACCGTTTCTTTTTGGCTTATTGCAGAAGGTAGTTGCTCCTTTGGCATATGTGTGCGCTGATAGCAGAATATATAACGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCGAATACTCATAAACCAAGTTTTCATGTGAACACTAGTTTAATGTCCAAGCATAGTTCTGGCAAAGGAGCTACTTCAGCTCAAAGAGGTGGGCGGATGCCGACACCTAATATTGAAGAAACCATGACTGAGGAAGAATTCTTTGAGTGGTTTCAGAATGCAGTACAGGCAGGTGTGTTTGACAATTATAGTGGCACTGCAGCAGAAAGCCCATCTTCCAAATCTGGAAATGGGATGAAAAGTCCTGGCAATGGTAGTGGTAGTAGCACCAAGAGAAAGAAAAAAGGAAAAAAGCAATGGTGA 2202 0.4251 MARKGNQQKNGVDRHGLNHKKGGGGGVLPGMKGKGGPVKVFPGEEPANGDRPAGGLSHTECDASSACDDYNNEQRSEKIAGKEKQGMAAKHDLENSLSSGINSGDGSLNSEIPVYGENGTLPRSNQDQQSIKSRLSCILDGLHVRGVVERVEFADNMIIRRLRLSVFSIITAVTEWITRQAPLFVSLKTITIRAYDNIRTKVAHAYPVVLKWLMHFGSIMLLLSVFWLDCTLRGIDSFVRMGTTSFFTVIWCSIFSVISMIGMLKFLVVLGLAALIGFFLGLMLAILVVAILGVVTLWFYGSFWTTAFFIILGGLAFMLSHERMALFITTGYSVYCAWLYVGWLGLLLAFNLAFISSDILIYFLKKNIDQQSRSNPFEQTAGMHGQPGFNDEPMQGSSSENGPGPSADRNAGVPSTSGVDSDVTSEDEVVRLLNCSDHYSALGLTRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDASRKNGRHGFFSSGFARSDADGEDPFGDSRRIACKKCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVVAPLAYVCADSRIYNATEWYICQGMRCPANTHKPSFHVNTSLMSKHSSGKGATSAQRGGRMPTPNIEETMTEEEFFEWFQNAVQAGVFDNYSGTAAESPSSKSGNGMKSPGNGSGSSTKRKKKGKKQW* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2034 733 MobiDBLite consensus disorder prediction 1 72 - -
Apr1g2034 733 MobiDBLite consensus disorder prediction 698 733 - -
Apr1g2034 733 PRINTS DnaJ domain signature 459 474 IPR001623 -
Apr1g2034 733 PRINTS DnaJ domain signature 476 496 IPR001623 -
Apr1g2034 733 PANTHER OS03G0832900 PROTEIN 1 733 - -
Apr1g2034 733 MobiDBLite consensus disorder prediction 391 423 - -
Apr1g2034 733 Pfam DnaJ domain 437 501 IPR001623 -
Apr1g2034 733 Gene3D DnaJ domain 425 515 IPR036869 -
Apr1g2034 733 SUPERFAMILY Chaperone J-domain 432 519 IPR036869 -
Apr1g2034 733 CDD DnaJ 437 493 IPR001623 -
Apr1g2034 733 ProSiteProfiles dnaJ domain profile. 437 504 IPR001623 -
Apr1g2034 733 PANTHER OS03G0832900 PROTEIN 1 733 - -
Apr1g2034 733 MobiDBLite consensus disorder prediction 698 722 - -
Apr1g2034 733 SMART dnaj_3 436 496 IPR001623 -
Apr1g2034 733 ProSitePatterns Nt-dnaJ domain signature. 481 500 IPR018253 -
Apr1g2034 733 MobiDBLite consensus disorder prediction 645 670 - -
Apr1g2034 733 MobiDBLite consensus disorder prediction 645 665 - -
Apr1g2034 733 MobiDBLite consensus disorder prediction 375 423 - -
Apr1g2034 733 Pfam Cleavage inducing molecular chaperone 547 644 IPR032843 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2034 Apr-Chr1 29902994 29909100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2034 1 704 Miscellaneous Gene Families AT5G49580 51.909 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2034 K09534 - gmx:100789594 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2034 1 29902994 29909100 Apr1g2034 1 29902994 29909100 ECH