Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2033 ATGGATATTAGAGGACATGGGGTTTTCCCGGAGGAGGTGGTTATACAGATTCTTGCAAGGTTGCCTGTGAAGTCCCTTTTTAGGTGCAAAACCGTGTGCAAACTTTGGTATAGGTTGTCTTTTGATAAGTATTTCATTCAAATCTATAATGAGGTATCTAGGAAGAATCCCATGATTCTGGTGGAGATTTCAGATTCCTCAGAGTCCAAATCTAGCTTAATCTGTGTTGATAATTTAAGGGGCGTGTCTGAATTTTCACTGAACTTTTTAAATGATAGAGTTAAGGTTCGAGCATCTTGTAGTGGTTTGTTGTGTTGCTCTAGTATTCCTGATAAGGGTGTCTTCTATGTTTGCAACCCTGTCACTCGAGAGTACAGGTTACTTCCTAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCAGATGGTGAAGCTACCTTGGTTGGCTTGGCCTGCGATCCGACGTATCAGAAGTTCAATGTTGTTTTAGCTGGTTACCATCGCACTTTTGGTCATAGGCCAGATGGAAGTTTCATTTGTTTGGTGTTTGATTCGGAGTTGAACAAGTGGAGAAAGTTCATTTCATTCCAAGATGACCATTTTACTCATATGAATAAGAACCAAGTAGTTTTTGTCAATAATGCGTTGCACTGGTTGACTGTTAGCTCTACTTATATACTTGTGCTTGATTTAAGTTGTGACATTTGGAGGAAGATGTCATTGCCGTATGACTTGATTTATGGAATGGGAAATAGGATTTATCTCTTGGACTTTGATGGCTGTCTTTCTGTTATTCAAATTTCTGAAGCGTGGATGAATATATGGGTGCTAAAGGATTACTGGAAAGATGAGTGGTGTATGGTAGATAAGGTGAGTCTGAGGTGTATAAGAGGAATGGTACCAGGCATTTTTCCAATCAGTCAAACAAGTGGATATGTTTTTTTGGCAACTCATAAGCAGATTTTGGTGTATCATCGCAAGAGTCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCAACACTCCCATTATGGTTTTCAGCACATGCATATCGCAGCAGCATGTTCTCGTGTAATTGA 1083 0.397 MDIRGHGVFPEEVVIQILARLPVKSLFRCKTVCKLWYRLSFDKYFIQIYNEVSRKNPMILVEISDSSESKSSLICVDNLRGVSEFSLNFLNDRVKVRASCSGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERPVTRFYPDGEATLVGLACDPTYQKFNVVLAGYHRTFGHRPDGSFICLVFDSELNKWRKFISFQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDIWRKMSLPYDLIYGMGNRIYLLDFDGCLSVIQISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTSGYVFLATHKQILVYHRKSQVWKEMYSVKYSSTLPLWFSAHAYRSSMFSCN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2033 360 ProSiteProfiles F-box domain profile. 3 52 IPR001810 GO:0005515
Apr1g2033 360 Gene3D - 9 45 - -
Apr1g2033 360 TIGRFAM F_box_assoc_1: F-box protein interaction domain 99 326 IPR017451 -
Apr1g2033 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 358 - -
Apr1g2033 360 SUPERFAMILY F-box domain 8 78 IPR036047 GO:0005515
Apr1g2033 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 358 - -
Apr1g2033 360 Pfam F-box-like 10 43 IPR001810 GO:0005515
Apr1g2033 360 SMART fbox_2 9 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2033 Apr-Chr1 29899265 29900505 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2033 - - gmx:100811223 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2033 1 29899265 29900505 Apr1g2033 1 29899265 29900505 ECH