Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1874 ATGGCTCAGGAGCCTCACCTTACGCTCAAGGAGCTGGGATCCAAGCTCGACACTCTTCCCTCCTCTAAGAACATTCTCATCAAGCTCTTGAAGCAAGCAGCAGCATGCCTTACTGACTTGGATCAATCACCATCAGCTTCAACATTAGAGTCAATTAAGCCCTTTATTAATGCAATTGTTATGCCAGAATTGCTGAAGCACCCAGATAGCGATGTCAAGCTTCTAGTTGCAACATGTGTTTGTGAGATAACTCGGATAACTGCTCCTGAAGCTCCTTACAGTGATGATCTTCTAAAGGACATCTTTCGATTGATTGTCGACACTTTTAGTGGTCTAAGTGATACATGTAGCTCATCCTTTGGCCAGAGAGTTGTTATATTGGAGACTCTTGCAAAATATAGATCATGTGTTGTAATGTTGGATCTTGAATGTGATGATCTGGTGAATGAAATGTTCAGTACTTTCTTTGCAGTTGCCAGAGATGATCATCCAGAAAGTGTTCTGTCATCCATGCAAACTATAATGGTTGTTCTCTTGGAAGAGAGTGAGGATGTCCGCAAGGATCTATTATCTATTCTACTGTCAACATTTGGTCATGACAAAAGAGATATTACTGCAGCTGCGAGGAAGCTTTCCATGAATGTTATACAACAATGCATTGGAAAACTTGAACCCAGCATTAAACAATTTTTACTGGCTGACCAGATGGAAACTCGATTGGAAGCAGTGAACTTGGTTGGCGATATAATTGCTCATCTTGGATCCTCCATTCCAGAAGCATTTCTACCAATATTTTTGGAGTTTTTAAAGAGATTGACTGATAGAGATTTTGGGCTTCACGTGTCTGTCCTCAATCATGTGAAGAGTTGTCTGCTGTCAAATCCTTCAAGGGCTGAAGTTCCTCAAATAATCTCTGCCCTTTGTGACCGGCTGCTGGATGTTGATGAAAATATTCGTAAGCAAGTTGTGGCTGTTATCTGTGATGTGGCATGTCATACCTCAAATGCAGTCCCTCTTGAAACTGTGAAACTTGTTGCAGAGCGGCTTGGTGATAAATCTCTACTTGTTAAAATGTATACCATGGAGAGATTGGCTGAGATGTATAGAATTTTTTGTGAGAGTAGTTCCAATGCAGTTAATCCCAGTGAATATGACTGGATTCCCCGGAAGATCCTTAGATGTTTCTATGACAAATATTTCAGATCAGATATAATTGAATCTATTCTATGTGAGTCCCTATTTCCATCAGAGTTTTCTGTCAATGATACAGTTAAACGCTGGGTTGAGATTTTCTCTGGATTTGACAAAGTGGAGGTCAAGGCTCTTGAAAAGATACTGGAGCAAAAACAACGGTTACAGGAAGAGATGCAGAAATATCTTTCTCTAAGGCAGATTAATCAGGAGAAAGACATTCCTGAGGTCCAGAAAAAGATCATGTTCTGTTTCCGTGTTATGTCTCGTTCATTTGCTGACCCAACAAAGGCTGAAGAGAGTTACCAGATTCTTGATCAATTAAAAGATGCTAATATCTGGAAAATTTTGACAGATCTTGTTGATCCAAATACTAGCTTCCATCAAACTCGTGTATACAGGGATGAATTGCTTAAAATACTTGGTGAAAAACATCAGCTCTATGAATTTCTGAATACCTTCTCCATAAAGTGCTCCTATTTGCTTTTCAACAAGGAGCATGTAAAAGCTATTCTTTCAGAAATCATCACACAAAAATCTGCAGAGAGTGATCAGCATATTCAATCTTGCATAAATATGTTAGTGATAATTGCTCGTTTCAGTCCATATCTTTTTAGTGGTAGTGAGGAGGAGCTGGTGAATTTACTTAAGGATAATAGTGATATGATTAAAGAGGGTGTTTTAAATGTTTTGGCAAAGGCTGGTGGTACTATTCGTGAACAGCTTGCAGTTACATCAAGTTCTGTAGACCTTATGTTGGAGAGACTGTGTTTAGAAGGCAGTCGGAGACAGGCCAAGTATGCTGTTCATGCTCTGGCTGCAATAACAAAGGATGATGGCCTCAAGTCTCTTTCTGTTCTGTACAAGAGGCTTGTAGATATGCTGGAGGAGAAAACACATCTACCTGCAGTATTGCAGTCTCTAGGGTGTATAGCACAGACTGCAATGCCTGTATTTGAAACTAGAGAGAGTGAAATTGAAGAATTTATAATAAACAAGATTCTGAAAAGTGATAGTAAAGAAGATCACACAAGAACATCGTGGGATGATAGAAGTGATCTTTGTGTGTTGAAGATATATGGCATCAAAACCATAGTGAAAAGCTTCTTGCCAATCAAAGATGCTCATGTGCGTCCTGGTATTGATGGTTTGTTGGATATCCTTAGAAACATGTTATCTTATGGTGAAATATCAAAGGACATACAGTCAAGCTCAGTTGATAAGGCCCATTTGAGGCTTGCTTCTGCAAAAGCAGTTCTTCGTTTGTCGAGGCTTTGGGATCATAAGATACCCGTTGACATATACCACTTAACTGTAAGAGCAACAGAGATTAGCTTCCCTCAAGCTAAGAAAGTTTTCTTGAGCAAAGTTCATCAATATATAAAAGACCACCTTTTGGATGCCAAATATGCATGTGCCTTTATATTCAATATATTTGGATCCAAGCCAGAGGAGTTTGCAGAGGACAAGCAGAACCTGGGTGACATTATTCACATGCATCACCAAGCTAGGGCTTGGCAGCTTTCTGGACAATCAGATGCAAATTCCTTGATCACTTACCCTGAATACATCCTTCCTTATTTAGTTCATGCCCTTGCTAACATATCATGCCCTAATATTGAAGAGTGCAAGGATGTTGAAGCATATGATAATATATACAGGCAGTTGCACTTGGTACTATTAATGCTAGTGCAAACAGATGAAGATGTCAAGTCAGAACTAAATACTGACAAAGAGAAGGAAATTATATATACCATCACTTCTATCTTTTGGAGTATTAAGCAATCTGAAGATGTGTTTGATGCATCAAAATCAAAGAATTCTCATGCCATATGTGACCTTGGGTTAGCAATCATCAGGCGACTAGTACAGAAGGATGTCGATTTGCAAGGATTATCTCCATTTTCTCTGCCTCCAATACTATACAAAGGCAAAGCATGTGAGAAGGAAAACGACCTTATGGTAAGTGAGGTGAAATCCTGGCTGGCTGATGAAAATGTCTTGGCTCACTTTGAATCACTTGAATTAGAAATGGTTCCATCTCAATTAGCCGAGGATGGTGCTTTAAAGGAAAGTGAGAAAGATGGAAATGAAATGCCCCTGGGAAAAATAATGAAGGACATAAAATCTCAGGGAACCAAGGGCAAAAAACTGAAAAAGAAAAAATCTGTGCCAGCTGAAACCAAAAAGGCTGAAAATGATATTGATATCTTAAATATGGTCAGACAAATAAATTTGGATAACTTGGGGATATCCACTAATTTTGAATCAAGTAATGGTCATGAAAATTCATTGAGTAAAAAGATGCAGCAGAAGGATCCAGACAGTGCAACAATTAAAAAACGTAAAACAGGAGATCTAACACCTGTTCCGGTGCCTAAACGTAAGCGGTCTTCCTTTACCCATGGAAAATCAAGATCAAGTAGTACTCCAAAAGCCCCCGAAAGAGTTTCAGGGAAAGATTCTTCTGGAATGAAATTGCTGTTACGTGCAGAAATTAACCCTGATATAGATATCAAAACTAAGCAGAGAAAAATGGTCAAAGGCAGAGGGGCTTCTAAGAGCTATCATGACTATGACTCTGACAAATCTGAAGAGCACTTGAAGAGTCCTGATAATTTAAAGCCAACTGATAATTCTAAAAGTGACAATTTGAAGTCATCCATAGGATCTACTAAAAAGATGAAAAGAAAAAGTATTGGGGGATTAGCTAAGTGTACGACAAACAAAGGTGAAAGTGATGCTGACGATCTGATTGGCTGCAGAATTAAAGTTTGGTGGCCTATGGATAAGCAATTTTATGAAGGGACGGTTAAGTCTCATGATCCTTTGAAGAGGAAGCATGTGATATTATATGACGATGGGGATGTAGAAATACTCCGTTTGGAAAAGGAGCGTTGGGAGGTTGTTGGCAGGGACCACAAACCTACTAAGAAGCCAAAGTCATCAAAAACTCTCTCTTTTCGTGAAGAGTCTACTGGGAAGAAGCAGAGAAGTTCTAGTGGTTCAGCAAATAAGAAGACAAAAAAAATAGTTAATGGTAAGCAATCTCCTCGAAAGCACGTAAAAGGACAGAAAGGTGCATCAAAAAATAATTTCCATCATGAGGATGCATCAAACCCTGAAGATAACATTGTATCTAAAGCTGAGATTAATTCAGGTGGTTCTGAAGGGGAACAAGCTGAAGGGTCTGATGTAATCATAAACAAGGAGAAGAAATTCAGCAAGAAAGTAAAATCAATTTCACGGGGAAAGAAACCAAAGAAAGAGAAGAGCTTGAGTTATAGGAAAGAATCAGATAAAGAGACCCTGGATTATGGCGAGAGGCTTTCCAAAGATAAAGTGGGTGTCCCACAAGGAGTTCAAAATGATGATGAAGAAAGTAGATCAAAAGAGACAGATGTGGATGAATTGAGAGGAGCTTTGAGGAAAAATGATGATGGAGGAGAATCAGGTTCTGAAGGGAACCAAAATGAGGGCGATGGGGAAAGTAGTCCCATAGAAGTGGAAAAATCGCTAATAGAGTCAGCAAGTCCTGATGGTGACAGAATTGCTGAGGTTTCTGATGACGAGCCACTGAGCAAATGGAGGCGTCCCTCGGCAAAGAAAAGCTCAGGGAAAAAACGGTGA 4821 0.3933 MAQEPHLTLKELGSKLDTLPSSKNILIKLLKQAAACLTDLDQSPSASTLESIKPFINAIVMPELLKHPDSDVKLLVATCVCEITRITAPEAPYSDDLLKDIFRLIVDTFSGLSDTCSSSFGQRVVILETLAKYRSCVVMLDLECDDLVNEMFSTFFAVARDDHPESVLSSMQTIMVVLLEESEDVRKDLLSILLSTFGHDKRDITAAARKLSMNVIQQCIGKLEPSIKQFLLADQMETRLEAVNLVGDIIAHLGSSIPEAFLPIFLEFLKRLTDRDFGLHVSVLNHVKSCLLSNPSRAEVPQIISALCDRLLDVDENIRKQVVAVICDVACHTSNAVPLETVKLVAERLGDKSLLVKMYTMERLAEMYRIFCESSSNAVNPSEYDWIPRKILRCFYDKYFRSDIIESILCESLFPSEFSVNDTVKRWVEIFSGFDKVEVKALEKILEQKQRLQEEMQKYLSLRQINQEKDIPEVQKKIMFCFRVMSRSFADPTKAEESYQILDQLKDANIWKILTDLVDPNTSFHQTRVYRDELLKILGEKHQLYEFLNTFSIKCSYLLFNKEHVKAILSEIITQKSAESDQHIQSCINMLVIIARFSPYLFSGSEEELVNLLKDNSDMIKEGVLNVLAKAGGTIREQLAVTSSSVDLMLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIINKILKSDSKEDHTRTSWDDRSDLCVLKIYGIKTIVKSFLPIKDAHVRPGIDGLLDILRNMLSYGEISKDIQSSSVDKAHLRLASAKAVLRLSRLWDHKIPVDIYHLTVRATEISFPQAKKVFLSKVHQYIKDHLLDAKYACAFIFNIFGSKPEEFAEDKQNLGDIIHMHHQARAWQLSGQSDANSLITYPEYILPYLVHALANISCPNIEECKDVEAYDNIYRQLHLVLLMLVQTDEDVKSELNTDKEKEIIYTITSIFWSIKQSEDVFDASKSKNSHAICDLGLAIIRRLVQKDVDLQGLSPFSLPPILYKGKACEKENDLMVSEVKSWLADENVLAHFESLELEMVPSQLAEDGALKESEKDGNEMPLGKIMKDIKSQGTKGKKLKKKKSVPAETKKAENDIDILNMVRQINLDNLGISTNFESSNGHENSLSKKMQQKDPDSATIKKRKTGDLTPVPVPKRKRSSFTHGKSRSSSTPKAPERVSGKDSSGMKLLLRAEINPDIDIKTKQRKMVKGRGASKSYHDYDSDKSEEHLKSPDNLKPTDNSKSDNLKSSIGSTKKMKRKSIGGLAKCTTNKGESDADDLIGCRIKVWWPMDKQFYEGTVKSHDPLKRKHVILYDDGDVEILRLEKERWEVVGRDHKPTKKPKSSKTLSFREESTGKKQRSSSGSANKKTKKIVNGKQSPRKHVKGQKGASKNNFHHEDASNPEDNIVSKAEINSGGSEGEQAEGSDVIINKEKKFSKKVKSISRGKKPKKEKSLSYRKESDKETLDYGERLSKDKVGVPQGVQNDDEESRSKETDVDELRGALRKNDDGGESGSEGNQNEGDGESSPIEVEKSLIESASPDGDRIAEVSDDEPLSKWRRPSAKKSSGKKR* 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1163 1187 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1237 1304 - -
Apr1g1874 1606 Coils Coil 442 469 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1368 1606 - -
Apr1g1874 1606 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 231 1564 - -
Apr1g1874 1606 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 6 232 - -
Apr1g1874 1606 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 231 1564 IPR039776 GO:0007064
Apr1g1874 1606 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 6 232 IPR039776 GO:0007064
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1106 1125 - -
Apr1g1874 1606 Gene3D - 1308 1363 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1579 1595 - -
Apr1g1874 1606 Pfam Sister chromatid cohesion protein PDS5 protein 231 1023 - -
Apr1g1874 1606 SUPERFAMILY Tudor/PWWP/MBT 1314 1353 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1394 1408 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1237 1273 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1442 1456 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1426 1440 - -
Apr1g1874 1606 CDD TUDOR 1322 1361 IPR002999 -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1409 1425 - -
Apr1g1874 1606 SUPERFAMILY ARM repeat 48 694 IPR016024 -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1152 1223 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1521 1547 - -
Apr1g1874 1606 MobiDBLite consensus disorder prediction 1484 1509 - -
Apr1g1874 1606 Gene3D - 7 450 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1874 Apr-Chr1 28335136 28357294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1874 K11267 - gmx:100816692 2453.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2291 9 30625430 30627727 Apr1g1874 1 28335136 28357294 PCT