Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1782 ATGAGACCAAGCGAATCTCTTTCTTCTCTCATTCTTGTTTTTGCAATCACATTCCATTGTACTGGCATAAACTGTGAAGACCCATATAGGTTCTTTAATTGGAGGGTCACCTATGGTGACATTCACCCTCTTGGTGTTAAGCAACAGGGTATTTTGATTAATGGGCAATTCCCAGGACCTAAAATAGACGCGGTTACAAATGACAACTTGATCATCAGTGTGCATAACTACCTTAAAGAGCCATTTCTCATATCATGGAACGGCTTACAGCAAAGGAAGAATTCATGGCAAGATGGAGTCTATGGCACAAATTGTCCAATCCCACCTGGGAAGAATTTCACTTACGTTCTCCAAGTGAAAGACCAAATTGGTAGCTTTTTCTATTTCCCATCTCCTGGAATGCAAAAAGCCGCTGGAGGATTTGGTAGAATCAGAATTCGGACTCGTCCTCAGATTCCTGTTCCTTTTCCTCCTCCTGCAGGGGACTTCTCAATACTTGCTGGAGATTGGTTCAAAACAAACCATCGTACACTGAATAGAATCCTTGAGAATGGTCATAATCTTCCCTTCCCTCATGGACTTATCATCAATGGACGTGGTTGGAATCGAACCACTTTTACCGTTGATCAAGGTAAAACTTACAGGTTCAGGATATCCAATGTGGGGCTCACAACATCCATCAACTTCAGAATCCAGGGCCACAAAATGAAACTTGTAGAGGTAGAAGGATCTCACACCATTCAGAACATCTATTCTTCCCTTGATATCCATCTTGGGCAATCCTACTCTGTGCTTGTCACAGCTGATCAGCCTCCAAAGGATTACTACATAGTTGTCTCTACAAGATTTACCAAACGGATACTCACAACAACAGCTACTCTTCACTATAACAATTCGTTCAAAAGGGTATCTGGTCCCATTCCCCCGGGGCCTACCCATGACATTGCTTCCTCTCTTTTTCAGGCCAGAACTATCCGGTGGAACCTGACAGCAAGTGGACCTAGACCAAACCCTCAGGGATCATACCACTATGGATTAATAAAACCCACTAGAAGCATCATTTTGGCAAACTCTTCCCCTTTTATAAAGGGGAAGAAGAGGTATGCAGTCAACAGTGTCTCATATGTTGCACCAGAAACCCCGTTGAAGCTAGCTGACTACTTCAACATCTCTGGTGTTTTCTCTGTTGGAAGCATTCCTACCACCCCTACCAAGGCCAAACCCCACCTCCAAACTTCTGTCATGGGGGCTAACTTTCGTGAGTTTGTGGAGATTGTGTTCCAAAATTTGGAGAACTCCGTGCAGTCATGGCATGTTGATGGCTATTCTTTCTTTGTTGTAGGGTTTGGTAGTGGGCACTGGACACCTGCAAGTAGAGCAAACTACAATCTAAAAGACGCTATTCCTAGATGCACCACTCAGGTGTACCCTAGGGCATGGACTGCAATGTACATGGCGCTAGACAATGTGGGGATGTGGAACATAAGGTCTGAGAATTGGGGAAGGCAATTATTGGGGCAGCAATTATGTCTGAGGCTGTATACATCGTCCAACTCATTGAGGGATGAATATTCAATCCCAAAGAATGCAATTCTTTGTGGCAGGGCAAGAGCTTGCCACAACACGCTAGGCTTTTCTAATTTAAGATTTTGA 1653 0.4392 MRPSESLSSLILVFAITFHCTGINCEDPYRFFNWRVTYGDIHPLGVKQQGILINGQFPGPKIDAVTNDNLIISVHNYLKEPFLISWNGLQQRKNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSFFYFPSPGMQKAAGGFGRIRIRTRPQIPVPFPPPAGDFSILAGDWFKTNHRTLNRILENGHNLPFPHGLIINGRGWNRTTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMKLVEVEGSHTIQNIYSSLDIHLGQSYSVLVTADQPPKDYYIVVSTRFTKRILTTTATLHYNNSFKRVSGPIPPGPTHDIASSLFQARTIRWNLTASGPRPNPQGSYHYGLIKPTRSIILANSSPFIKGKKRYAVNSVSYVAPETPLKLADYFNISGVFSVGSIPTTPTKAKPHLQTSVMGANFREFVEIVFQNLENSVQSWHVDGYSFFVVGFGSGHWTPASRANYNLKDAIPRCTTQVYPRAWTAMYMALDNVGMWNIRSENWGRQLLGQQLCLRLYTSSNSLRDEYSIPKNAILCGRARACHNTLGFSNLRF* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1782 550 CDD CuRO_3_AAO_like_1 378 499 IPR034275 GO:0005507
Apr1g1782 550 SUPERFAMILY Cupredoxins 156 336 IPR008972 -
Apr1g1782 550 SUPERFAMILY Cupredoxins 346 535 IPR008972 -
Apr1g1782 550 CDD CuRO_1_AAO_like_1 31 146 IPR034273 GO:0005507
Apr1g1782 550 Pfam Multicopper oxidase 380 516 IPR011706 GO:0005507|GO:0016491
Apr1g1782 550 PANTHER MULTI-COPPER OXIDASE 10 537 IPR045087 -
Apr1g1782 550 PANTHER L-ASCORBATE OXIDASE HOMOLOG 10 537 - -
Apr1g1782 550 Gene3D - 19 148 IPR008972 -
Apr1g1782 550 Pfam Multicopper oxidase 163 298 IPR001117 -
Apr1g1782 550 Gene3D - 161 333 IPR008972 -
Apr1g1782 550 SUPERFAMILY Cupredoxins 24 175 IPR008972 -
Apr1g1782 550 Pfam Multicopper oxidase 36 149 IPR011707 GO:0005507
Apr1g1782 550 Gene3D - 346 542 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1782 Apr-Chr1 27567999 27570685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1782 - - gmx:100775521 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1782 1 27567999 27570685 Apr1g1782 1 27567999 27570685 ECH
Apr1g1782 1 27567999 27570685 Apr3g1076 3 25386450 25390589 ECH