Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1524 ATGTCTTCCGAAATGCATAACAATTCTACGTCCTCCTCCGCCATCGCCGCCGATCCCGGTCATCAGCAGCCGGCGGCAGCTCCGCTGAGCCGATACGAGTCGCAAAAACGGCGAGACTGGAACACCTTCGGGCAATACTTGAAGAATCAAACACCCCCAGTTTCACTGTCCCAGTGCAACTTCAACCACGTGCTTGAGTTCCTTCGCTACCTTGACCAATTTGGCAAAACCAAGGTCCACTTGCATGGTTGCATATTTTTCGGGCAACCCGACCCGCCTGCACCGTGTACTTGCCCTCTCCGGCAAGCTTGGGGGAGTCTCGACGCTCTCATAGGTCGGCTTAGAGCCGCCTATGAAGAGCATGGCGGTTCCCCCGAGACTAATCCCTTTGGGAGTGGAGCTATTCGTGTGTATCTTCGTGAAGTTAAAGAGTGTCAAGCAAAGGCCAGAGGGATCCCATATACAAAGAAGAAGAAGAAGAGGAACCAAATTAAAGGCACTCATGATCCAAAGTCCTTCAAGCAATTGGCTACTTGA 537 0.5214 MSSEMHNNSTSSSAIAADPGHQQPAAAPLSRYESQKRRDWNTFGQYLKNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKRNQIKGTHDPKSFKQLAT* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1524 178 Pfam ALOG domain 24 144 IPR006936 -
Apr1g1524 178 PANTHER PROTEIN G1-LIKE2 4 174 IPR040222 -
Apr1g1524 178 MobiDBLite consensus disorder prediction 150 178 - -
Apr1g1524 178 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 4 174 - -
Apr1g1524 178 MobiDBLite consensus disorder prediction 1 18 - -
Apr1g1524 178 MobiDBLite consensus disorder prediction 1 34 - -
Apr1g1524 178 ProSiteProfiles ALOG domain profile. 31 158 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1524 Apr-Chr1 24730139 24737957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1524 - - gmx:100306082 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1524 1 24730139 24737957 Apr1g1524 1 24730139 24737957 ECH
Apr1g1524 1 24730139 24737957 Apr3g0977 3 24654586 24655125 ECH
Apr2g0459 2 5303065 5304955 Apr1g1524 1 24730139 24737957 ECH
Apr5g0162 5 1429603 1430166 Apr1g1524 1 24730139 24737957 ECH
Apr2g1856 2 24145293 24145826 Apr1g1524 1 24730139 24737957 ECH
Apr3g0977 3 24654586 24655125 Apr1g1524 1 24730139 24737957 ECH