Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1305 ATGGGTTTGCCTAACTCAATGATTCCACTCATGGCTATCCTCCTAGGCATAGTATCACTATCACAAAGGTCTAATGCACAGAACTCACCGCAAGACTACCTGAACGCTCACAACACAGCCCGTTCCCAAGTTGGGGTAGGGCCCATGACATGGGATGCAACTGTTGCCTCTTATGCACAAAACTATGTGAACACACTGAAAGGAAGCTGCAAGCTGGTGCACTCTGGGGGTCGTTATGGAGAGAACCTTGCGTGGAGCAGTGGTGACCTCACAGGCATAGCTGCTGTTACAACTCAAACACTTGTGTTGGTGGGGAGTGCCGCCACTACACACAGGTGGTTTGGCGCAACTCAGTGCGTCTTGGGTGTGCCAAAGTGCGGTGCAACGATGGTCGCAGCACCATCATCAGCTGCAACTATGATCCACCTGGAAACTATGTTGATCAGAGACCTTATGATATCAGTCCTTTCCAAGTACCATTGA 483 0.5031 MGLPNSMIPLMAILLGIVSLSQRSNAQNSPQDYLNAHNTARSQVGVGPMTWDATVASYAQNYVNTLKGSCKLVHSGGRYGENLAWSSGDLTGIAAVTTQTLVLVGSAATTHRWFGATQCVLGVPKCGATMVAAPSSAATMIHLETMLIRDLMISVLSKYH* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1305 160 SMART SCP_3 28 132 IPR014044 -
Apr1g1305 160 Pfam Cysteine-rich secretory protein family 34 72 IPR014044 -
Apr1g1305 160 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 21 97 IPR001283 -
Apr1g1305 160 PANTHER PATHOGENESIS-RELATED PROTEIN 1 21 97 - -
Apr1g1305 160 Gene3D CAP 22 128 IPR035940 -
Apr1g1305 160 SUPERFAMILY PR-1-like 23 94 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1305 Apr-Chr1 21980642 21981158 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1305 K13449 - jre:108992380 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1305 1 21980642 21981158 Apr1g1305 1 21980642 21981158 ECH