Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1301 ATGTCAAGGAGGCCAGTAAATCCATCACGTCGGTTGGCTGATGGGGGAAGTATACCGTTTGTGGCATCTATCCAGTCTAAATCTCAGAACTCTCCCCTACTATCTATTGGGCTTGTAATTGTGGGTGCAATCCTCCTGATCGGTTATTGTTACAGCAGTTCAGGTGGAGCTAGCATTGATATTAAGGATGTAAATAAACTTGAAGGTGGTGCATCGTGCACATTTGAAGTCCTGCAAGCATTGCCCTTTTTGAAGAAAGCATATGGAGACAGCATGCATAAGGTTTTGCATGTTGGTCCTGACTCTTGTTCTGTGGTATCTAGTTTGTTAGTAGAAGAGGATACTGAGGCTTGGGGAGTAGAACCATATGAATTAGATGACGCTGGTGCAAAGTGTAAAAGTCTTGTACGCAAGGGCATTGTGCGTGTGGCTGACATAAAGTTTCCTCTACCCTACCGTGCAAAGTCATTTTCTCTGGTCATTGTGTCAGATGCATTGGATTACTTATCTCCAAGATATCTGAATAAAACCATGCCAGAGTTAGTTAGGGTATCTGCTGATGGTGTTGTTGTCTTTTCAGGTTATCCGGGTCAGCAGAGAGCAAGAGGTGAAGTGGCTAAATTTGGTCGTCCAGCCAAATTGCGTAGCTCCTCTTGGTGGATAAGGTTTTTCTATCAGACTAGAATAGAAGAAAATGAAACCGCTGCAAAGAAGTTTGAACAAGCTTCAGCTAAGAAGGCATACAAGCCAGCATGCCAAGTTTTTCACCTCAAATCATACCCTTGA 786 0.4338 MSRRPVNPSRRLADGGSIPFVASIQSKSQNSPLLSIGLVIVGAILLIGYCYSSSGGASIDIKDVNKLEGGASCTFEVLQALPFLKKAYGDSMHKVLHVGPDSCSVVSSLLVEEDTEAWGVEPYELDDAGAKCKSLVRKGIVRVADIKFPLPYRAKSFSLVIVSDALDYLSPRYLNKTMPELVRVSADGVVVFSGYPGQQRARGEVAKFGRPAKLRSSSWWIRFFYQTRIEENETAAKKFEQASAKKAYKPACQVFHLKSYP* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1301 261 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 261 - -
Apr1g1301 261 Gene3D Vaccinia Virus protein VP39 76 253 IPR029063 -
Apr1g1301 261 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 261 IPR044689 GO:0008168|GO:0045488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1301 Apr-Chr1 21933851 21939445 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1301 K23871 - gmx:100800870 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1301 1 21933851 21939445 Apr1g1301 1 21933851 21939445 ECH