Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1058 ATGCCTCATCGCTCTTCGATGCCTTCTCTCCTCATTTACATGTTGGCTACTTTTGCCTCTTTCTACGTCGCTGGAAGATTATGGCAGAACACCGAGGACAGGATTTATCTCATAAAGGAGCTTGATAAGTTTACTGGGCAGGGACAATCTTCATTATCAGTGGACGATACATTGAAAATCATAGCCTGCAGGGAGCAACATAAGAAGCTTGATGCCCTTGAGATGGAACTTGCTACAGCTAGACAAGAGGGCTTTGTTTCAAATCACGTTATAGAGGCTAATAATGGGACGTACTCTAAGAAAAAGCCATTGGTAGTTATTGGAATATTTACAAAGTTTGGCGGCCAAAACAATAGAGAAGCAATTCGTAAAGCATGGATGGGAGTTGGTGCAGCTTTGAAGAAAATGGAAGATAGAAAGGGTATTATCACACGATTTGTTATTGGAAGAAGTGCAAATCGTGGGGACAATCTGGATAGGGACATCGATCGTGAGAATTGGCAGAATAATGACTTTCTAATTCTTGATGATCATGTGGAAGCAAATGAGGAGCTTCCCAAGAAGTCTAAATTGTTCTTTGCTCGTGCGGTAAATAAATGGGATGCTGACTTTTATGCTAAAGTCAATGATGATGTTTATGTAAACATTGATGCCTTGGGAGCTACACTTACAACTCATTTGGACAAACCTCGTGTTTACATAGGTTGCATGAAATCAGGAAAAGTTTTCTCTGAACCGAACCATAAATGGCATGAGCCTGAATGGTGGAAATTTGGTGACAAAAAAACATATTTTCGTCATGCATCAGGAGAGATGTATGTCATATCAAAAGCATTAGCAAAATTCATTTCAACAAACAAATCAATTCTTCGTACATATGCCCATGCTGACATTACTGCTGGATCCTGGTTTATTGGGCTTGATGTGAAGCATGTTGATGAACAGAAGTTTTGTTGCTCATCTGGATCAGCAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTGAATCAAATTCAGTTACAAACATATCAAGAAGATGGAAAATCATCTTCGTTTTTCAGGAGCGCTGTGTTCAGGTGTTTAGAGGTTATTATTGCGGTGTCTGA 1107 0.3993 MPHRSSMPSLLIYMLATFASFYVAGRLWQNTEDRIYLIKELDKFTGQGQSSLSVDDTLKIIACREQHKKLDALEMELATARQEGFVSNHVIEANNGTYSKKKPLVVIGIFTKFGGQNNREAIRKAWMGVGAALKKMEDRKGIITRFVIGRSANRGDNLDRDIDRENWQNNDFLILDDHVEANEELPKKSKLFFARAVNKWDADFYAKVNDDVYVNIDALGATLTTHLDKPRVYIGCMKSGKVFSEPNHKWHEPEWWKFGDKKTYFRHASGEMYVISKALAKFISTNKSILRTYAHADITAGSWFIGLDVKHVDEQKFCCSSGSAGLSLSLSLSLCESNSVTNISRRWKIIFVFQERCVQVFRGYYCGV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1058 368 Coils Coil 63 83 - -
Apr1g1058 368 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr1g1058 368 Gene3D - 99 348 - -
Apr1g1058 368 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 3 325 - -
Apr1g1058 368 Pfam Galactosyltransferase 118 313 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1058 Apr-Chr1 18477649 18482381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1058 9 326 Glycosyltransferase AT5G53340 67.925 1.80e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1058 K20854 - gmx:100779561 514.227