Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1057 ATGGACTATGATTTCATGACGAGGCCTCCACCCTACAACTCATCATCATCTTCTTCTCAGGCCATGTACCCCAAGATCTCCCCTCACGCTCCTCGCCCCTCACACCATCATCACTCTTCTGCCCCTTCCTCTTCTCCGGGATTGGGCATTAGGGTTTTCCTAAAGCCAGAATATAGGATCACTCCGCCGCCTCATTTGTTACCACATTCTGGAGATATTCCACGTAGCAACTTCCAGTTTGATTTTGGATTGGAGAGAAAAGTTCTTGCTGAAGCAAATAAGGAAAACCCAAATTGGAGCAAGTTTGGGATGGAAAATCTTCCAACTAAGGTTACTGAATCACCATCACCAAAGATTTCTGTTTCAGATCCCATTGTGAGCAAATATATTGCCATGGGGCTCAGCCGAGAGGCTGTTCCCATTGCTGTTGCAAATTATGGTGATAATCCAACCAGGATCCAGGAATTTGTTAAGGGCTATACCCTTCTACGTGACATGGGATTTTCATCGACCAGCGTTGTCGAAGCCTTGGTTATGTATGACAATGATACGGACAAAGCATTATCACATTTTCTTAACGGTTCATCATGA 591 0.4484 MDYDFMTRPPPYNSSSSSSQAMYPKISPHAPRPSHHHHSSAPSSSPGLGIRVFLKPEYRITPPPHLLPHSGDIPRSNFQFDFGLERKVLAEANKENPNWSKFGMENLPTKVTESPSPKISVSDPIVSKYIAMGLSREAVPIAVANYGDNPTRIQEFVKGYTLLRDMGFSSTSVVEALVMYDNDTDKALSHFLNGSS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1057 196 SUPERFAMILY UBA-like 156 194 IPR009060 GO:0005515
Apr1g1057 196 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 152 194 IPR015940 -
Apr1g1057 196 PANTHER LD44032P 18 196 IPR038870 GO:0000813|GO:0043130|GO:0043162
Apr1g1057 196 MobiDBLite consensus disorder prediction 1 47 - -
Apr1g1057 196 MobiDBLite consensus disorder prediction 9 24 - -
Apr1g1057 196 Gene3D UBAP1 SOUBA domain 120 195 IPR042575 -
Apr1g1057 196 PANTHER - 18 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1057 Apr-Chr1 18473878 18477061 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1057 - - aprc:113852741 261.922