Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1044 ATGGCAGAGACCCTTCGTATGGTTGTTGCTGTTATTGGGAATGTTGCTTCAGTGTCCCTTTATGCTGCACCAACGGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGCACAGAGGAGTTTTCTTGCATTCCTTACATAATAGCACTATTGAACTGTCTCCTTTTCACTTGGTATGGATTGCCAGTTATAAGCTACAAGTGGGAAAATTTCCCTCTAGTCACAGTTAATGGAGTTGGGATTGCTTTTGAGCTATCCTACCTTCTCATTTATTTTTGGTTTTCTACGGCCAAAGAAAAGGTGAAGGTAGCCATGACAGTAGTACCGGTTCTTCTAGTGTTTTGCGCCATTGCCATTGCATCAGCTTTTGCCTTCATTGATCATGGTCACCGAAAGCTTCTCGTGGGTAGCATAGGCTTGGGTGTTTCAGTTGCAATGTATGCATCCCCTTTGGTAGTAATGAGGAAAGTGATACAAACCAAGAGTGTGGAATTCATGCCACTACCTTTATCTTTGTGCTCATTCTTGGCTAGTGTACTGTGGCTGACTTACGGACTCCTCATTCGGGATATATTCGTTGCGGGACCAAGTGTGATTGGAACTCCCTTAGGCATACTCCAGCTCGTTCTCCACTGCAAATATTGGAAGAGGCGAGTGATGGAAGAACCAAATAAGGTGGAACTGCAGAAGGGGAGCGTAGAGAAAGTTGACATAGAAATGGGGGACGTGGAAAAGGGGAACATGGAAAAGAATGTGACAATTCGTAGTAACTGCAACTCGTGA 780 0.441 MAETLRMVVAVIGNVASVSLYAAPTVTFKRVIRKKSTEEFSCIPYIIALLNCLLFTWYGLPVISYKWENFPLVTVNGVGIAFELSYLLIYFWFSTAKEKVKVAMTVVPVLLVFCAIAIASAFAFIDHGHRKLLVGSIGLGVSVAMYASPLVVMRKVIQTKSVEFMPLPLSLCSFLASVLWLTYGLLIRDIFVAGPSVIGTPLGILQLVLHCKYWKRRVMEEPNKVELQKGSVEKVDIEMGDVEKGNMEKNVTIRSNCNS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1044 259 Pfam Sugar efflux transporter for intercellular exchange 8 97 IPR004316 GO:0016021
Apr1g1044 259 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Apr1g1044 259 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 244 - -
Apr1g1044 259 PANTHER RAG1-ACTIVATING PROTEIN 1 4 244 - -
Apr1g1044 259 Gene3D - 133 226 - -
Apr1g1044 259 Gene3D - 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1044 Apr-Chr1 18035459 18037640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1044 1 259 Miscellaneous Gene Families AT5G53190 50.193 3.82e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1044 K15382 - gmx:100785324 424.091