Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1015 ATGGCAGAGAGCAGTCCGAGGGAAATCCAAATCCGAGCCCTAACCGGTGAATCTATCACTCTCCCCATCACTGCCACCACAACCATCCAAGACCTCAAGCCTCTGCTCAACCAGTCATTCCCACCCGCCACCGTCTCCTCCAGTTTCCACCTCTTTTTCAAGGGTGACAAATTGAGATTGCAGACTCAGATTGGGTCTTACCCCATCCAACGTGGCGAGTTTCTTGTCCTGATTCCTTTTGCTAAGAAGGAACCGAAGAAACCGGACCCTGTTCCGGCTTCTTTAAATGCTCCTCACACTGCTTCAGCCTCTAATCTAGCGGATTCCACGTGGTCCACTATAATGGAGGATTTGTCACATTTACGTGACACCTCTGACAGTGCCGATAAAACAGAGGAAGTGTTGGAGACCCAAACCAAAGTGGATTTAGGTTCTGAGAAGCAGATAGAGCTTCCATATCATCTCATATTGAATTCGTTGGAGTGTAGTGGCGAGTGTGCTCTTGGCGAGCGTAATTGCAAGGTTTTTGTGAAGGTTTTGGAGTCTGTGAATTGTTTATCGGACCTGCCTCTTGGCCACTGCAAGTTGTTGAAACGAGCACGTGTGAAGGGTTTAGCTAGTGATGCTGTTACGTGTTTGTGTCCACCGTGGCTGAAGATAGTAGTTAAGGCATTTGCTTTTATAAACACATTTTCCGCCTTTGTTCATTTGCAGCGTAGGAAATTGACCTCGTGTCTTTTGGAAGAGGCGCTTAATCAGCTTGCAGAGTTCGGGGTTCAACTTGGGCTAAGTGACATGGAGCATCTTTCCCTTCTTTGTCCTCATCTGATATGTTTTGGAGATGACATAGAGAACGTGGGTTTTGGTGATGTCATTGTTGTTGTTAACCGTTCAACTAGCAACAAAGATAATATTGAAGACAATTCTAAAAGAGGGCGCAAGTGGTTGTATGTTTCAAAGATTTTTGAATTTGGAAATGAGATCACTTTGGGAATTTCCTTGGAAGAGCTGCTTAAGGCAGTCAAGGACAATGATTTTATTAGGAACGAAGACAAATCAAAAAGTGTAAAGAGAAGCAAAACTACCTCAAAACCTGAATTAAACTATATTGGGTGTCAGGAGACTAAGTCTTTACTGGCTGTAGACATGGTTGATCATCTTCAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATATGTGCCAGAGAAGCCATTTTTGGTGAGATCCCAATTGAACTATCAGAGAAAATGAGATCTGCTTTGAGGAGTATTGGAGTTTCCAAATTTTACACTCACCAGGCTGAGTCTATACAAGCCTCCCTTCATGGCAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCTCTGTGTTATAACCTGCCAGTTCTAGAGTTGTTGTTCAAGAATTCATCTTCATGTGCTCTGTACATATTTCCGACAAAGGCATTAGCTCAAGATCAATTAAGAGCTTTGTTATTCATGACAAAAGGATGTGGTGTTGACTTCAATATTGGTATATATGATGGTGACACTCCTCATAGTGAGAGGATGTGGCTACGTGATAATTCTAGACTGTTGATCACAAATCCAGATATGTTACACATAACAATCTTGCCCCACCATCAACAATTTAGTCGGATTTTATCAAACTTAAGGTTTGTGGTTATTGATGAAACTCATACTTACAAGGGAGCATTTGGATGCCATACTGCCCTTATACTGAGGAGGCTCAAACGACTCTGTTCACATGTATATGGAGCTGTTCCTTCTTTTGTTTTTTCCACTGCAACATCTGCAAATCCTCGTGAGCATTCTATGGAACTTGCCAATTTACATACGCTGGAGCTGTTTCAGAATGATGGAAGTCCATCTACAAGGAAACTTTTTGTCCTTTGGAATCCTGCTCTGCGGCCAAAAGCTATCTTTAAAAATGTTCAGTTTGCAAATTGTACCAATGAGTTGGCAGATGACAATGCAAATTTTGTTCGTTCAAGCTCGATTGTGGATGTTTCACGCCTTTTTGCAGAAATGGTTCAGCACGGTCTTCGCTGCATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTTGTTTTATCCTATACACATGATATTCTTCACGAGACAGCCCCACATCTGGAGGATTCCATATGCGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGCGTGCAATTTTTGGTGGTAAAATTTGTGGTGTTGCTGCAACTAATGCTCTGGAGTTGGGCATAGATATTGGAGAAATTGATGTCACTCTGCACCTAGGATTTCCTGGCAGTATTGCAAGCTTGTGGCAACAAGCCGGTAGGGGTGGGAGGAGAGATAGACCATCTCTTGCTGTCTATGTTGCATTTGGCGGGCCTCTTGATCAATACTTCATGAAACATCCGAACAAACTTTTTGAAAGACCAATTGAATGCTGTCATGTTGATTCCCAAAACAAGCAGGTTCTTGAACAACATTTGGTTTGTGCAGCTCATGAACACCCTCTGAGTGTGAAATATGATGAGCAGTATTTTGGTCCTTGCATAGAGAGTGTTTTAATTTCTCTAAAAGCTAGAGGATACTTGAGTTCTGTATCATCTGATTTGTCTTCTAGAATATGGAATTACATTGGTCCTGAGAAATTACCCTCACATGCTGTCAATCTCCGCGCAATAGAAACTGTAAGATACAGTGTCATTGATGAAAAAAAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCTTTCTTTCAGGTATATGAAGGTGCTGTGTATATGTGCCAGGGGAAAACCTATTTGATTGAAAAATTAGATTTATCTAACAAGACTGCTTTCTGCATAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATTGGGGGTAATATTGCCTATCCAGTAAAGTTAGAAACCAACATGTTTCCAAAATCAAATGCCCGAGCTGATGTATGCAAAGTGACAACTACTTGGTTTGGATTTTATCGCATTTGGAGGGGAAGCAATCGAATTTTTGATACTGTTGATCTAAACCTTCCTCAATATTCATTCGAGTCACAGGCAGTCTGGGTTCCAGTGCCACAGTCCATAAAAGAAGCAGTCATCAAGAAAAATTATGATTTCCGTGGAGGTTTGCATGCTGCTTCACATGCCCTTTTACATGTAGTGCCTTTACATATCACATGCAACTTGTCTGACTTGGCTCCTGAGTGTCCAAATCCTCACGATAGTCGATATTACCCTGAAAGAATTCTAATATATGATCAGCATCCTGGAGGGTGTGGAATTTCAGTACAGGTTCAACCCTATTTCACCAAGTTCCTGGCAGCTGCACTAGAGGTTCTCACGTGTTGCAGTTGCTCAGTAGAAGTAGGTTGCCCTAATTGTGTTCAGAGCTTTGCTTGCCATGAATATAACGAGGTCTTACACAAGGATGCGGCCATTATGCTGATGAAGGGTATTCTGGATGCAGAGAACTAG 3531 0.4177 MAESSPREIQIRALTGESITLPITATTTIQDLKPLLNQSFPPATVSSSFHLFFKGDKLRLQTQIGSYPIQRGEFLVLIPFAKKEPKKPDPVPASLNAPHTASASNLADSTWSTIMEDLSHLRDTSDSADKTEEVLETQTKVDLGSEKQIELPYHLILNSLECSGECALGERNCKVFVKVLESVNCLSDLPLGHCKLLKRARVKGLASDAVTCLCPPWLKIVVKAFAFINTFSAFVHLQRRKLTSCLLEEALNQLAEFGVQLGLSDMEHLSLLCPHLICFGDDIENVGFGDVIVVVNRSTSNKDNIEDNSKRGRKWLYVSKIFEFGNEITLGISLEELLKAVKDNDFIRNEDKSKSVKRSKTTSKPELNYIGCQETKSLLAVDMVDHLQKGIGSEGQIVHIEDICAREAIFGEIPIELSEKMRSALRSIGVSKFYTHQAESIQASLHGKNVVVATMTSSGKSLCYNLPVLELLFKNSSSCALYIFPTKALAQDQLRALLFMTKGCGVDFNIGIYDGDTPHSERMWLRDNSRLLITNPDMLHITILPHHQQFSRILSNLRFVVIDETHTYKGAFGCHTALILRRLKRLCSHVYGAVPSFVFSTATSANPREHSMELANLHTLELFQNDGSPSTRKLFVLWNPALRPKAIFKNVQFANCTNELADDNANFVRSSSIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYTHDILHETAPHLEDSICAYRGGYIAEERRKIERAIFGGKICGVAATNALELGIDIGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKHPNKLFERPIECCHVDSQNKQVLEQHLVCAAHEHPLSVKYDEQYFGPCIESVLISLKARGYLSSVSSDLSSRIWNYIGPEKLPSHAVNLRAIETVRYSVIDEKKNEVLEEIEESKAFFQVYEGAVYMCQGKTYLIEKLDLSNKTAFCIEADLKYYTKTRDYTDIHVIGGNIAYPVKLETNMFPKSNARADVCKVTTTWFGFYRIWRGSNRIFDTVDLNLPQYSFESQAVWVPVPQSIKEAVIKKNYDFRGGLHAASHALLHVVPLHITCNLSDLAPECPNPHDSRYYPERILIYDQHPGGCGISVQVQPYFTKFLAAALEVLTCCSCSVEVGCPNCVQSFACHEYNEVLHKDAAIMLMKGILDAEN* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1015 1176 Pfam MrfA Zn-binding domain 1065 1147 IPR018973 -
Apr1g1015 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 797 IPR027417 -
Apr1g1015 1176 ProSiteProfiles Ubiquitin domain profile. 7 78 IPR000626 GO:0005515
Apr1g1015 1176 Pfam DEAD/DEAH box helicase 435 604 IPR011545 GO:0003676|GO:0005524
Apr1g1015 1176 CDD Ubl_ubiquitin_like 9 78 - -
Apr1g1015 1176 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 675 831 IPR001650 -
Apr1g1015 1176 SMART ultradead3 429 635 IPR014001 -
Apr1g1015 1176 Pfam Helicase conserved C-terminal domain 682 788 IPR001650 -
Apr1g1015 1176 Gene3D - 8 99 - -
Apr1g1015 1176 PANTHER ATP-DEPENDENT HELICASE HRQ1 21 1175 - -
Apr1g1015 1176 CDD SF2_C_Hrq 635 799 - -
Apr1g1015 1176 Gene3D - 667 797 IPR027417 -
Apr1g1015 1176 SUPERFAMILY Ubiquitin-like 2 88 IPR029071 -
Apr1g1015 1176 CDD DEXHc_Hrq1-like 433 614 - -
Apr1g1015 1176 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 441 622 IPR014001 -
Apr1g1015 1176 Gene3D - 411 624 IPR027417 -
Apr1g1015 1176 SMART helicmild6 709 790 IPR001650 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1015 - - gmx:100819522 1944.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1015 1 16717921 16748261 Apr1g1015 1 16717921 16748261 ECH