Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1014 ATGGGCTGGGCTATAGCTCTACACGGTGGTGCCGGAGACATCCCCTTTTCATTGCCACCGGAACGCCGCCAGCCTCGAGAGGAAGCCCTCCGCCACTGCCTCCAAATCGGGGTTGAGGCTCTTAAAGCCAAGATGCCTCCTTTGGATGTTGTAGAGCTTGTGGTTCGTGAATTAGAAAATATTCCACACTTCAATGCGGGTAGGGGATCTGTGCTGACCAACAAAGCCACGATTGAAATGGAGGCTTCTATTATGGATGGCAGCACAAAAAGATGTGGAGCTGTTTCTGGGATCAAAACAGTTGTCAATCCCATTTATTTAGCAAGATTGGTCATGGAGAAGACTCCTCACATATATCTGGCATTTGATGGAGCTGAGGAATTTGCCAAAGAACAAGGTGTTGAGACCGTAGATCCCAGCCATTTTATTACTGCAGAAAATGTTGAGAAACTACAGCAGGCTAAAGAAGCCAACAGGGTCCAGATCGATTATACTCAACCCATCCAAAATGGAACCAAGGAAGAAACACCAATTGTTGCTAATGGTGATAGTCAACTAGGAACTGTTGGGTGTGTGGCTGTTGATAGTAATGGGAACCTAGCTTCTGCTACATCCACTGGAGGATTAGTGAACAAAAGGGTTGGTCGTATTGGTGACTCACCTATCATAGGTGCTGGGACATATGCCAACGAGCTTTGTGCTGTCTCAGCAACAGGGAAAGGTGAAGCAATACTACGTGCCACTGTTGCAAGAGATGTTGCTGCCTTGATGGAGTTCAAAGGTGTTTCTCTTAAGGAAGCTGCTAATTGTGTTGTACATGAACGCACACCAAAGGGCACTGTTGGTTTGGTTGCTGTTTCTGCTGCAGGAGAATTGGCAATGCCTTATAACACAACAGGCATGTTCCGAGCATGTGCCACTGAAGATGGATATTCAGAGGTTGCAATTTGGTCTGCTACCTAA 963 0.4663 MGWAIALHGGAGDIPFSLPPERRQPREEALRHCLQIGVEALKAKMPPLDVVELVVRELENIPHFNAGRGSVLTNKATIEMEASIMDGSTKRCGAVSGIKTVVNPIYLARLVMEKTPHIYLAFDGAEEFAKEQGVETVDPSHFITAENVEKLQQAKEANRVQIDYTQPIQNGTKEETPIVANGDSQLGTVGCVAVDSNGNLASATSTGGLVNKRVGRIGDSPIIGAGTYANELCAVSATGKGEAILRATVARDVAALMEFKGVSLKEAANCVVHERTPKGTVGLVAVSAAGELAMPYNTTGMFRACATEDGYSEVAIWSAT* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1014 320 CDD Asparaginase_2 4 310 - -
Apr1g1014 320 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 317 - -
Apr1g1014 320 Gene3D (Glycosyl)asparaginase 188 320 - -
Apr1g1014 320 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 317 IPR029055 -
Apr1g1014 320 PANTHER L-ASPARAGINASE 1 317 IPR000246 GO:0016787
Apr1g1014 320 Pfam Asparaginase 3 317 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1014 Apr-Chr1 16641363 16644765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1014 5 295 Miscellaneous Gene Families AT4G00590 24.000 1.31e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1014 K13051 - gmx:100799400 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1014 1 16641363 16644765 Apr1g1014 1 16641363 16644765 ECH