Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0990 ATGTCGAGCGCAACAGGAGCAACAGCCCTTCTGAAGGACGAGGTGGACATAGTGATCCCAACAATAAGGAGCCTTGAGTTCTTGGAGTCGTGGAGGCCATTCTTTGAGCCATACCATCTGATAATTGTGCAAGATGGTGACCCTTCCAAAGTCATCAAGGTCCCCCAAGGCTTCGATTACGACTACTACAATCACGACGATATTAAGCGCATTCTTGGACCTAAGGCCTCTTGCATTTCCTTCAAGGACTCTGCTTGTCGCTGCTTTGCTTTCCTCATCTCCAAGAAGAAGTACATCTTCACCATCGACGATGATTGCTTTGTTGCAAAAGATCCATCTGGCAAAGAAATTGATGCCCTGCACCAGCACCTTAAGAACCTTCTGACTCCATCAACCCCATTTTTCTTCAACACCCTCTATGACCCATACAGAGAGAGTACTGATTTTGTCCGTGGATATCCATTTAGTCTGCGTGAAGGTGTCCCAACAGCTGTTTCTCATGGCCTCTGGCTCAATATTCCTGATTATGATGCCCCAACCCAGCTTGTCAAGCCTCTCGAAAGAAACACTAGGTATGTAGATGCTGTTATGACGATACCAAAGGGAACTCTCTTTCCCATGTGTGCCATGAATTTGGCATTCAACCGTGAATTAATTGGCCCTGCAATGTACTTTGGACTCATGGGTGAAGGTCAACCTATTGGACGCTATGATGATATGTGGGCTGGCTGGTGCATAAAGGTTGTAAGTGATCATTTGGGATTGGGGGTGAAGACAGGCTTGCCTTACATTTGGCACAGCAAAGCTAGCAGCCCATTTGTGAACCTTATGAAAGAGTACAAAGGAATTTTCTGGCAGGAAGAGCTGATCCCCTTTTTCCAATCTGTAAGTCTTCCAAAGGAATGCACAACTGCTCAGGATTGCTATCTTGAACTCTCCAAGCAAGTTAAGGCAAAGCTTGGCAAAGTTGATGAGTATTTCGACAAGCTTGCAGATGCCATGGTGACATGGATTGAAGCTTGGAACGAGCACAACCCATCAGGGGAAAAATCCAATGCTCCCGCAAATTAA 1071 0.4594 MSSATGATALLKDEVDIVIPTIRSLEFLESWRPFFEPYHLIIVQDGDPSKVIKVPQGFDYDYYNHDDIKRILGPKASCISFKDSACRCFAFLISKKKYIFTIDDDCFVAKDPSGKEIDALHQHLKNLLTPSTPFFFNTLYDPYRESTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCAMNLAFNRELIGPAMYFGLMGEGQPIGRYDDMWAGWCIKVVSDHLGLGVKTGLPYIWHSKASSPFVNLMKEYKGIFWQEELIPFFQSVSLPKECTTAQDCYLELSKQVKAKLGKVDEYFDKLADAMVTWIEAWNEHNPSGEKSNAPAN* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0990 356 PANTHER UDP-ARABINOSE MUTASE 3 352 IPR037595 -
Apr1g0990 356 SUPERFAMILY Nucleotide-diphospho-sugar transferases 13 219 IPR029044 -
Apr1g0990 356 CDD Glyco_tranf_GTA_type 17 111 - -
Apr1g0990 356 Pfam Reversibly glycosylated polypeptide 11 345 IPR037595 -
Apr1g0990 356 PIRSF UPTG 5 349 IPR004901 GO:0016866|GO:0071669
Apr1g0990 356 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0990 Apr-Chr1 15190590 15192372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0990 K13379 - gmx:100816315 664.84