Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0989 ATGGGGCCTCCACCAGTAACCAGTTTGGGAGATTCTTTAACTAGTACAGACCAAAAGCAGAAAATGGTAAGAAAGAAGAAACAAGGTAACGTTGTTGAGCATGAAGGTCCTGATTTTTCAATCGATAATTCTGCATCAGAGGCGGGTGTGACTATAAAGCACCCATTACGTGAGTCCGCAGCTTTGCCTAGTTTGTTAAGTTGCCAAACAATTGTAGTGTGTGATTCAACAAAGAAAAATGGAGAGAGCAAACGGAAGAAAACAGAGCATAATGCTGTTGAAAGCAATGTTAATGATTGCAGTGCACCAGAAAATACTTTTTCATCAAGATCTTCCACATCTGGTTTGGATATGCCTTCAGAACATCCAATTCAATGTGTTTTAATTGATTCAGTAGCAAGACAATCTTGTGTGGACGAGGGTATTTGTCAAGGACATCATGAAGAAAACGAGCAGAATATGATCAATAAGACTGCAGGAAACAGCTGTGGACAGTGTGACGTTCAAAAAGGAAGCTGCAACCATGATTCAGTTGTAACAAATCCTGAGCATTTTGCAAAGGAGAGTGTGTTAGAAGTTGTGAAATTGAACATAGAGCAAGGTATAAATGATAACAGTTCCAACCCTGAGGATAAGAATGGTATTGTAAAAAATACAAGTCTGGTGAGGAAAAATTATCACTACCCAGCAGTTTATGACATATCTGATAAAAAACAGTGTGTTAAGACCTATTCAAGGAGAAAACCAGTTAATTCCAATTGTAGGAGAAGCAGTGGCCACCCAAGTCTTGAAAATTGTAACAATGAACCAACTATGCAGGACCATCACGGGGATGATTCATATAAATTTTCTGATGGACCATTGACAGTTGGCTTGATGGATAGAGAAACAAAACTTTCGAATGATGAAGTTACCTATCAAAGTGGAGCTGCAACTGAGGAAATGAATTTGAGAACAGACAACACTTGTGAGCAAAGATTTATGACTACATCTTCTGTAGTAGACATCCCTGCCCCTGGGGAGCAACTTGAAACAAGTGGTGGACAGCTAGATCATACTGAAATTACAAGAAATGATCTGTGTTGTGCAGGTGATGTTTCTGATTTAAGCTCAGTCAAAGTAAAAGATGGTCATTCAAAGATTTCACAATTCTTACTGGACAGAACTGTTGCCAGCAACACAAAGAATAAACTTCTCATACTTGATGTGAATGGACTTCTTGCTGATTTTGTCAGTGATACTGGTAGAAGATATGGACCAGAACCAGAGCCAGATTTTTGGCTTAAAAGGAGAAAAGTTTACAAGAGGCCCTTTTGTGATGATTTTCTACAGTTTTGCTTTGACAAATTTCATGTGGGGATTTGGTCATCTAGAGCCAAGAGGAATGTTGATGAAGCAATTGAATTTCTAATTGGGAAATCTGCATCAAAACTGCTCTTTTGTTGGTCCCACTGTACTATTACTGAATTCACCACTGTTGAGAATAGAAACAAGCCGCTGGTTTTGAAGGAACTTGTAAAGTTGTGGGAAAAATCGGAACCTGGTTTACCATGGGAGAAGGGAGAGTTTAATGAGTCAAACACATTATTATTGGATGACTCTCCATACAAAGCACTAGTGAATCCTAGGCATACAGCAATATTTCCTTATTCTTACCGGTACTACGACACCACAGACTCGTCATTAGGACCAGAAGGTGATCTTCGGGTTTATCTAGAAGGGCTGGCTATGGCTGATAATGTTCAAGAGTACGTGTCAGCAAATCCATTTGGTCAAAGGCCCATAAGAGAAACAAATCCATCTTGGGGTTACTACCGTAAAGTCATTGAAGCTGTTAAAACAGCCAAAATGCTAGCTAGGCACTCATCACCAGGTAGGGAGCCAACTGCTAACAGAACAATGCACAATGAAAAATGTTAA 1920 0.3943 MGPPPVTSLGDSLTSTDQKQKMVRKKKQGNVVEHEGPDFSIDNSASEAGVTIKHPLRESAALPSLLSCQTIVVCDSTKKNGESKRKKTEHNAVESNVNDCSAPENTFSSRSSTSGLDMPSEHPIQCVLIDSVARQSCVDEGICQGHHEENEQNMINKTAGNSCGQCDVQKGSCNHDSVVTNPEHFAKESVLEVVKLNIEQGINDNSSNPEDKNGIVKNTSLVRKNYHYPAVYDISDKKQCVKTYSRRKPVNSNCRRSSGHPSLENCNNEPTMQDHHGDDSYKFSDGPLTVGLMDRETKLSNDEVTYQSGAATEEMNLRTDNTCEQRFMTTSSVVDIPAPGEQLETSGGQLDHTEITRNDLCCAGDVSDLSSVKVKDGHSKISQFLLDRTVASNTKNKLLILDVNGLLADFVSDTGRRYGPEPEPDFWLKRRKVYKRPFCDDFLQFCFDKFHVGIWSSRAKRNVDEAIEFLIGKSASKLLFCWSHCTITEFTTVENRNKPLVLKELVKLWEKSEPGLPWEKGEFNESNTLLLDDSPYKALVNPRHTAIFPYSYRYYDTTDSSLGPEGDLRVYLEGLAMADNVQEYVSANPFGQRPIRETNPSWGYYRKVIEAVKTAKMLARHSSPGREPTANRTMHNEKC* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0989 639 MobiDBLite consensus disorder prediction 18 33 - -
Apr1g0989 639 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 95 617 - -
Apr1g0989 639 SUPERFAMILY HAD-like 393 584 IPR036412 -
Apr1g0989 639 SMART forpap2 395 557 IPR004274 -
Apr1g0989 639 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 95 617 - -
Apr1g0989 639 MobiDBLite consensus disorder prediction 1 43 - -
Apr1g0989 639 MobiDBLite consensus disorder prediction 250 276 - -
Apr1g0989 639 Gene3D - 365 590 IPR023214 -
Apr1g0989 639 MobiDBLite consensus disorder prediction 619 639 - -
Apr1g0989 639 MobiDBLite consensus disorder prediction 79 118 - -
Apr1g0989 639 MobiDBLite consensus disorder prediction 250 270 - -
Apr1g0989 639 MobiDBLite consensus disorder prediction 79 93 - -
Apr1g0989 639 Pfam NLI interacting factor-like phosphatase 397 582 IPR004274 -
Apr1g0989 639 ProSiteProfiles FCP1 homology domain profile. 392 575 IPR004274 -
Apr1g0989 639 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0989 Apr-Chr1 15123589 15128071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0989 - - aprc:113864558 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0989 1 15123589 15128071 Apr1g0989 1 15123589 15128071 ECH