Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0977 ATGGATTTGTGGGTTGTTGCAGCAGCCGCTGGAGCTGGGTGTTTAGCTAAATATTGGAACAGGAACTCAAAAAGTGGCAACAGCACTTGCCTTTCCGCTTTAGAGAATTCATGTTTTGAGAATCCTGAGTCCCCGAGCAGCCCCTTTCCCTTCTCCAAACAAGCACGAAGAGATGTTTATTCAGATGTGAAGTCCTCAGATCTGAACACACCTGGTACTCTTTTGACAGGAGAAGTAGCTTCTAACAAAGGGCTTAATAGTGAACAAATAAGACACTTCCGTAATTATAACAAGCTTGATGTCCTATCTATATTGAACTTAGCAGTGTCTTTAGCACCGTATGATGATAAGTTTAAGGATGTTAAAGATGGACATATGCCAGGCTCTTCTGATATTGTTGGCAATTGTGGTTTCTTTCTTCCCGATTCTTCTGTTGAAGTGGTTCCTATTCGTAACTCTTCTGGTCATAAAACCTTTCTCAAGACGAAGCGTTTGTCTGGGCGTGTTAGTAGACGTTTAAGTTCCTTAGAAAGTTGCTGCATGGCTCAGCTATACAAGGAGCATGCTGAAACAGAATACGTCTTTAGTTCTTTTTCGTCCCCATCCACAACTACAAGATCATTTCTTGTAAGCAATGGAAGCCAAATAATCAACAGACCAAATAATAATTTGTTCAGTGCATCATTTGGAAGCAAGGAACATAAGTTGCATAAAGAAGCTAGTCAAGTAAAGGACGAAAATGTATTTGGCGTTCCTTCCTTACAGATGAAATTTAATGCAGTCATCGGAGGACGTCGAAGATTGAGCTCTTCTGATGATGCGTTGAGTGAAAAACTCTTCCATACTCAATGTGATACAACATTTCTCTTCATTCTTGGGATTTCTTTTGGGATGATAACTTCCATCATGGCAAATGAAAGAGAAATAGACAAGTTAAGAGAGTTGTTGAAGCAGACAGAAAACTTGGTTCAAGATTTACAAGAGGAACTTGAAATGAAAGATTCACTGACTGTGAAGGAGATACATAATGAAAATTATGGTTCACAGGATGCATGTGATCATTTCTCTTATGAGAAGGAGCTGAATGAATTTTCCCCTGAAAAACATATGGATAACTCACCAAGAATTGACTCCCAAGAATCATATGATCAGAAGGTAGAACAGAGTTCAGAATCCATGAGCAAAATTGAAGCTGAGCTTGAAGCTGAACTTGAGAGATTGGGGTTGGACATGAATGCATCAAGCCTAGAAAAAAAATTATCCGAGCTTGTTGAGCTTGACCCAGAGTTTGTAGCAGATTTTGCTCAAGGTGATTTAAGAGCTGACAGGATCGGTGGCAATGATTTTGTCCCTCTAAAATCAAATGATGATGCCAGTGACCCAACACCTCTACCTGGTAACTATGCAGTTTTGCCTCATGAGCTGAGTTTGCGTTTGCATGAAGTTAAACAATCCCAACTTGAGCAACGCGTGAAGGAACTTGAGATTGCACTTGAAAGCAGCCAAAGGAAAGTACGACTTTTGGAATTGGATCAGGAGGGTCATTTCGAAAAGGTATCTTCCTTTACCAAAGGAAATGAAGACTGGGATCCTATGTCCCAGCCCTTAGTTCTCAATTTATCAGGTGAAGCTCTCGATGCATACAATGAGGCCTATGAAGAATTAATAAAGATAAATGACTCTGAAGAAAATTCACCCTCAGAGATCTATGATAGTGGTGACCACAAAGAAGGTTCACATTCACAAGATTGGCATGCATTTGAGGTTCAACACGGAGGAGCAAATGGTGCCGCAACTTATCCTGCAAGTGAGCTCTCTTTTAGCAAGGTGACCATGTTGGAAGGGAATTCTAGCATTTGTGAATTAGATGGTACTGAAGTTGAAAGTTGTGGTTTTGATGGTGAGGTAGAACAGCAATTGATAAGGCAAATCGTTGAAATGACCAAGAAAGGTTCTCCAGTTTTTAAATATGCAGAGAGGATATTGTATTCTATGGATGAAGACCAACATTGA 2013 0.4009 MDLWVVAAAAGAGCLAKYWNRNSKSGNSTCLSALENSCFENPESPSSPFPFSKQARRDVYSDVKSSDLNTPGTLLTGEVASNKGLNSEQIRHFRNYNKLDVLSILNLAVSLAPYDDKFKDVKDGHMPGSSDIVGNCGFFLPDSSVEVVPIRNSSGHKTFLKTKRLSGRVSRRLSSLESCCMAQLYKEHAETEYVFSSFSSPSTTTRSFLVSNGSQIINRPNNNLFSASFGSKEHKLHKEASQVKDENVFGVPSLQMKFNAVIGGRRRLSSSDDALSEKLFHTQCDTTFLFILGISFGMITSIMANEREIDKLRELLKQTENLVQDLQEELEMKDSLTVKEIHNENYGSQDACDHFSYEKELNEFSPEKHMDNSPRIDSQESYDQKVEQSSESMSKIEAELEAELERLGLDMNASSLEKKLSELVELDPEFVADFAQGDLRADRIGGNDFVPLKSNDDASDPTPLPGNYAVLPHELSLRLHEVKQSQLEQRVKELEIALESSQRKVRLLELDQEGHFEKVSSFTKGNEDWDPMSQPLVLNLSGEALDAYNEAYEELIKINDSEENSPSEIYDSGDHKEGSHSQDWHAFEVQHGGANGAATYPASELSFSKVTMLEGNSSICELDGTEVESCGFDGEVEQQLIRQIVEMTKKGSPVFKYAERILYSMDEDQH* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0977 670 PANTHER EMB|CAB62613.1 1 670 - -
Apr1g0977 670 MobiDBLite consensus disorder prediction 559 580 - -
Apr1g0977 670 MobiDBLite consensus disorder prediction 364 391 - -
Apr1g0977 670 Coils Coil 477 511 - -
Apr1g0977 670 Coils Coil 302 336 - -
Apr1g0977 670 PANTHER EMB|CAB62613.1 1 670 IPR040348 GO:0008356
Apr1g0977 670 Coils Coil 386 406 - -
Apr1g0977 670 Coils Coil 545 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0977 Apr-Chr1 14798995 14803328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0977 - - gmx:100801395 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0977 1 14798995 14803328 Apr9g2952 9 36399365 36404237 ECH
Apr1g0977 1 14798995 14803328 Apr1g0977 1 14798995 14803328 ECH