Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0973 ATGGCTGTTCAGAGCCCCACTTTCAGCGAAGCTCAAGCTTCGAAGAATGTTTTGAATGGCCATTTCTTTGTATGGAGAGAGTTTGTGTGGGGAGCTGTCGCGGGTGCTTTTGGGGAAGGAATGATGCATCCGGTGGATACTATTAAAACTAGAATACAAAGTCAAGCTATTCTAAATGGAGTTCAGAACCAGAAAAACATACTGCAGATGGTGCGATCTGTCTGGCAGCTTGATGGATTCAGAGGCTTTTACAGGGGTGTAACACCTGGTATTACTGGATCTCTTGCAACTGGTGCAACATATTTTGGTGTCATAGAGTCCACAAAAAAGTGGATTGAGGATTCACATCCTAGCCTTAGGGGCCATTGGGCACATTTCATTGCTGGAGCTGTTGGAGACACTCTAGGTTCTTTTGTGTATGTTCCATGTGAAGTGATCAAGCAACGCATGCAAATTCAAGGCACAATTACATCTTGGAGTTCTGTTGCCATGAAGGATGGAATTGCAATGAAACCTAGCACACAAATGTATGGTTATTATACAGGGATGTTCCATGCTGGCAGCTCAATATGGAAAACGCAGGGCTTAAAGGGCATATATGCAGGATATTTGTCTACACTGGCAAGGGATGTTCCATTTGCTGGCCTAATGGTCATGTTCTATGAAGCTTTGAAAGATGTTACAGAATATGGGAAGCAAAGATGGATACCTAGCCCAAATTGGCATGTCAATAATACATTTGAGGGGCTTGTTTTAGGAGGATTAGCTGGTGGTCTCAGTGCATACCTCACCACTCCTTTGGATGTTGTTAAAACAAGACTGCAAGTGCAGGGTTCAACTTTGAGGTATACTGGTTGGTTGGATGCAATTTGCAATATATGGGCTACGGAAGGCGTGAAGGGGATGTTTAGGGGTAGCATTCCCAGGATTACGTGGTATATTCCAGCTTCAGCGCTTACATTCATGGCTGTGGAATTTCTCAGAGATCATTTTAATGAAAGAGTGCCCAATGATAATTTACGAGATGTTGCTAGATTATCAGTAGACAAGAAGAAATCTCTGCAGGAGGTTGCTTAA 1077 0.4318 MAVQSPTFSEAQASKNVLNGHFFVWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQAILNGVQNQKNILQMVRSVWQLDGFRGFYRGVTPGITGSLATGATYFGVIESTKKWIEDSHPSLRGHWAHFIAGAVGDTLGSFVYVPCEVIKQRMQIQGTITSWSSVAMKDGIAMKPSTQMYGYYTGMFHAGSSIWKTQGLKGIYAGYLSTLARDVPFAGLMVMFYEALKDVTEYGKQRWIPSPNWHVNNTFEGLVLGGLAGGLSAYLTTPLDVVKTRLQVQGSTLRYTGWLDAICNIWATEGVKGMFRGSIPRITWYIPASALTFMAVEFLRDHFNERVPNDNLRDVARLSVDKKKSLQEVA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0973 358 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 355 - -
Apr1g0973 358 Pfam Mitochondrial carrier protein 122 227 IPR018108 -
Apr1g0973 358 Pfam Mitochondrial carrier protein 246 333 IPR018108 -
Apr1g0973 358 Pfam Mitochondrial carrier protein 23 114 IPR018108 -
Apr1g0973 358 Gene3D Mitochondrial carrier domain 3 168 IPR023395 -
Apr1g0973 358 Gene3D Mitochondrial carrier domain 169 348 IPR023395 -
Apr1g0973 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 111 IPR018108 -
Apr1g0973 358 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 355 - -
Apr1g0973 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 330 IPR018108 -
Apr1g0973 358 SUPERFAMILY Mitochondrial carrier 23 327 IPR023395 -
Apr1g0973 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 227 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0973 Apr-Chr1 14627404 14632429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0973 245 344 EF-hand Containing Proteins AT2G35800 32.039 1.06e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0973 - - gmx:100790921 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0973 1 14627404 14632429 Apr1g0973 1 14627404 14632429 ECH