Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0972 ATGGTCAGACCTTGTGATATTTGCGGTGATGTTGGTATTCTTGAAGCAATTGTTACTTGCTCTAAATGCAATGTAAATTGTGAACACGTTTATTGCATGCGGATTAATGTCCTCAAACTTCCAGAATACTGGCTTTGTGAATCTTGCCAAGCTAAACATGTTACAATTTCACCATGTAAAGTAAATCAGGATATTGATTCACAGGCTTCTAAAAGGCTACGAGCTGTTACAACAGGGAAAGTGAAGTTCCTTCATGAGGATGAAGTCATTAAACTTTCCTCTGTTCAATTTTCCATGAAACCTATTACAGCAAATTCTACTTTGCTGACTGCCCGAAAGGCTTCTGTTGGGTCCAAAAATATTATTTCCAAGATTCCCTCCCTGGCACCAAAATTAAACCCGTGCATAACACCTCCTAAGGTACTTGGGAAGCGCCCAAGAGATGGTGGAGCACATAAGAAGCTGATGACTAGTCAGCATGCTTCCTACTCATTAACAAAACGACTGCCAAAGGAGCATATTGGTGAAAATCATCTGTCTTTGGGTGGACTGATACCTGAGAAAAAAGTTCAAAACGATGATCATCAGAAAGAAAAGCCTACAAAAGGGGCAGCTTTTGAAGCTTTGTCAGCAAGAAAACCTTCACCTATTTTTGGTTCAGGTGGTATTCTTTGTGCTGATGCTGAATGTAACCGGTCTAATATTAAAAAAAGAAGCCATAAGAATGTTCAAGAAAACCTGAATCTTCATCGCAAATTTTTACCCTCTTCTAGTCCTACCTGGAGGGGTCAATTCCAAATTTTTCATGATGCTGCTTCTGGCAAATTTTATGATGGGTTTGAGGCTCAACCTCCATGCATTGTTAATAGTAAAGCATACAAATTTTCAAGTCAAATGCCCTCAGTCCTTCAACTGGAATCACTTCCTGTATTGAATGTCTTAACTGACATATTCCTGGATGATTATCCTAGTCTTCAAGATATTGCATTGTACTTCTTTCCATCAGAACATACTGAGAGATCGAGAAAGAACCTGAACAGCATATTGAAGTTTATGAACACTGAGAAATCAATGCTAAGAAGTTGCATTAATGGAGTAGAGTTGTTGGTATTTACATCAAATCAGCTTGATATGGACTCCAGGGGGTATATTGCTGCAGTAAACGCTGGATATTTCCTGTGGGGAATCTTTCGCCAAAAAAAAATTGATAAACCTATTGAAAGAGTACTTGATATGGAGCCAGTTGACATGGAAATTGATATGATTGGAGGAAAGGACGTGAAGGGGAGAGTGGATAATGTTCAAAAAGCTAAAACTATAAGTCGAAATGTCATGGAATGTGATAAATTTTTGGACAATATGGATGTTCCGCCAGGCTTTGAAGCACATGCCAAAAAGTCTTAA 1404 0.386 MVRPCDICGDVGILEAIVTCSKCNVNCEHVYCMRINVLKLPEYWLCESCQAKHVTISPCKVNQDIDSQASKRLRAVTTGKVKFLHEDEVIKLSSVQFSMKPITANSTLLTARKASVGSKNIISKIPSLAPKLNPCITPPKVLGKRPRDGGAHKKLMTSQHASYSLTKRLPKEHIGENHLSLGGLIPEKKVQNDDHQKEKPTKGAAFEALSARKPSPIFGSGGILCADAECNRSNIKKRSHKNVQENLNLHRKFLPSSSPTWRGQFQIFHDAASGKFYDGFEAQPPCIVNSKAYKFSSQMPSVLQLESLPVLNVLTDIFLDDYPSLQDIALYFFPSEHTERSRKNLNSILKFMNTEKSMLRSCINGVELLVFTSNQLDMDSRGYIAAVNAGYFLWGIFRQKKIDKPIERVLDMEPVDMEIDMIGGKDVKGRVDNVQKAKTISRNVMECDKFLDNMDVPPGFEAHAKKS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0972 467 PANTHER - 2 466 - -
Apr1g0972 467 PANTHER ZINC ION-BINDING PROTEIN 2 466 - -
Apr1g0972 467 SUPERFAMILY FYVE/PHD zinc finger 4 54 IPR011011 -
Apr1g0972 467 SMART PHD_3 4 50 IPR001965 -
Apr1g0972 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 75 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0972 Apr-Chr1 14554546 14564548 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0972 - - ccaj:109815968 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0972 1 14554546 14564548 Apr1g0972 1 14554546 14564548 ECH