Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0964 ATGGGATGTTTGGCGAGCAAAAACGCCGACACCAAGGCCAATAGAACCGCGCGTTGGCGATCTACAGGCATTGTTGCTTTGCGCGATTCCAAATTGAAGACATTTCCAGATGAAATTCTCGATTTAGATAGATCTGTTCGCACGCTTGACTTAACACATAATCGAATAGTTGACATTCCTGTTGAAATCAGCAAATTAACTAATGTACAGCGCCTGGTACTAGCGGAGAACCTCATTGAGAGACTGCCAGTAAATTTGGGGAAACTTCAATCTCTAAAACTCATGAACCTTGATGGAAATCGAATAACATCCTTGCCTGATGAATTGGGCCAGTTAGTAAGGCTTGAATGCTTGTCCATCTCAGGGAATTTGTTAACATCCTTGCCAGCAACTATTGGCAGTTTGAGAAATCTGTTGCTTTTAAATGTGTCAAATAACAAGTTACAGTCACTTCCAGAGTCTGTTGGGAGTTGCTTCTCTCTGGAAGAATTACAAGCTAATGATAATGTTATTGAAGATCTTCCCTCTTCTGTGTGCAATCTCTCTCACTTAAAGTCACTTTGCTTGGATAACAATAATTTGAAGCAGATACCTTTAAATTTATTGAAAGACTGCAAAGCTCTTCAGAACATATCACTGCATGGTAATCCTATATCAATGGATCAATTTCAACTGATGGATGGGTTTCAAGAGTTTGAAGCTAGGAGGAAAAAGAAGTTTGACAAACAAATTGATTCAAATGTGATGATCAGTTCCAAAGGTCTGGATGAGGGTGTTGATCTATGA 786 0.3944 MGCLASKNADTKANRTARWRSTGIVALRDSKLKTFPDEILDLDRSVRTLDLTHNRIVDIPVEISKLTNVQRLVLAENLIERLPVNLGKLQSLKLMNLDGNRITSLPDELGQLVRLECLSISGNLLTSLPATIGSLRNLLLLNVSNNKLQSLPESVGSCFSLEELQANDNVIEDLPSSVCNLSHLKSLCLDNNNLKQIPLNLLKDCKALQNISLHGNPISMDQFQLMDGFQEFEARRKKKFDKQIDSNVMISSKGLDEGVDL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0964 261 Gene3D Ribonuclease Inhibitor 4 122 IPR032675 -
Apr1g0964 261 Gene3D Ribonuclease Inhibitor 123 226 IPR032675 -
Apr1g0964 261 ProSiteProfiles Leucine-rich repeat profile. 183 203 IPR001611 GO:0005515
Apr1g0964 261 Pfam Leucine rich repeat 44 102 IPR001611 GO:0005515
Apr1g0964 261 ProSiteProfiles Leucine-rich repeat profile. 137 158 IPR001611 GO:0005515
Apr1g0964 261 SMART LRR_typ_2 89 111 IPR003591 -
Apr1g0964 261 SMART LRR_typ_2 66 88 IPR003591 -
Apr1g0964 261 SMART LRR_typ_2 44 65 IPR003591 -
Apr1g0964 261 SMART LRR_typ_2 112 134 IPR003591 -
Apr1g0964 261 SMART LRR_typ_2 181 204 IPR003591 -
Apr1g0964 261 SMART LRR_typ_2 135 158 IPR003591 -
Apr1g0964 261 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED 2 253 - -
Apr1g0964 261 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Apr1g0964 261 ProSiteProfiles Leucine-rich repeat profile. 45 67 IPR001611 GO:0005515
Apr1g0964 261 SUPERFAMILY L domain-like 24 221 - -
Apr1g0964 261 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 253 - -
Apr1g0964 261 SMART LRR_bac_2 135 154 - -
Apr1g0964 261 SMART LRR_bac_2 181 200 - -
Apr1g0964 261 SMART LRR_bac_2 89 108 - -
Apr1g0964 261 SMART LRR_bac_2 160 177 - -
Apr1g0964 261 SMART LRR_bac_2 112 131 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0964 46 219 Receptor kinase-like Gene Family AT5G46330 31.707 2.36e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0964 - - gmx:100807758 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0964 1 14240699 14249620 Apr1g0964 1 14240699 14249620 ECH