Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0956 ATGGTTTCTGAGACAAGCCAATCCAAGAATGTCTGTGTAATTGGGGCTGGACCATCAGGGCTAGTGGCAGCAAGGGAGTTGAGAAAAGAGGGTCATAAGGTGGTTGTATTGGAGCAGAATCATGATGTTGGTGGGCAATGGCTATATGAACCAAATGTAGAAGGGGAGGATCCTTTAGGAAGGAACCCTTTTCTAAAGGTGCATAGCAGTGTCTATGAATCTTTAAGGCTCACTTCTCCAAGGGAGATCATGGGGTTCACTGATTTTCCCTTTATGGTCAAGAAAGGTAGAGACATGAGGAGGTTCCCTAGCCATAGAGAGCTTCTTCTCTACCTAAAGGAATTTTGTGAATGGTTTGGGTTGAGAGAAATGATAAGGTTTAATACAATGGTGGATTATGTGGGGATGTTAGATTATGGTGTCTGTAGTAATGATTTGAAGTGGGTTGTTAGAAGCAAAGAGAAGAAGAGTGAAAAGGTGGTGGAAGAGGTCTTTGATGCAGTGGTTGTGGCCACTGGTCATTACTCTCAACCAAGATTGCCCTCCATTAAAGGAATGGATACATGGAAAAGGAAACAAATGCATAGTCACATTTACAGGACCCCAGAACCATTCCGCAATGAGACTGTGGTGGTGGTTGGAAACTCCTTAAGTGGGCAAGACATATCAATAGAGCTTGTGGATGTAGCAAAGGAAGTCCATATGAGTTCCAGATCTCTTAAAATCTCTGAGGGTTTATCTAAAGTCATATCCAAGCACACCAACCTTCACCTTCATCCACAGATAGATACCCTTCAAGATGATGGGCGAGTCACATTCGTGGATGGTTCTAGCATTCTTGCAGACTCCATTTTGTACTGCACAGGGTACTCCTATGCATTCCCCTTTCTTGACACCAAAGAAATGGTGGTTATAGATGATGACAGAGTGGGCCCTTTGTATGAGCACACTTTTCCCCCATCACTTGCTCCATCTCTTTCCTTTATAGGCATCCCTAGAAAGATCATAGGATTCCCTTTCTTTGAGTCTCAAGCAATATGGATAGCTCAACTGCTTTCCGGGAAAAGAGTATTGCCATCATGGGAGGAAATGATGAGATCCATCAAGGAGTTCTACCATTCAAGAGAAGTAGCAGGCATTCCTAAGCACTGTACACATGAAATTGCAAACTTTGAGTACTGTGATAAATATGGAGAACATGTAGGGTTCCCACGTTTAGAAGAATGGAGAAAACAGCTATGTCTATCAGCCATAATTAACTCTGATGTGAACTTGGAGACATATCGAGATTCGTGGGATGATGATGAACAGCTCCAAGAGGCCCTTCAAAGTCCTCACTTCACTCAACTTGGACTTGAAGATTCTCCCCTGTAA 1374 0.4309 MVSETSQSKNVCVIGAGPSGLVAARELRKEGHKVVVLEQNHDVGGQWLYEPNVEGEDPLGRNPFLKVHSSVYESLRLTSPREIMGFTDFPFMVKKGRDMRRFPSHRELLLYLKEFCEWFGLREMIRFNTMVDYVGMLDYGVCSNDLKWVVRSKEKKSEKVVEEVFDAVVVATGHYSQPRLPSIKGMDTWKRKQMHSHIYRTPEPFRNETVVVVGNSLSGQDISIELVDVAKEVHMSSRSLKISEGLSKVISKHTNLHLHPQIDTLQDDGRVTFVDGSSILADSILYCTGYSYAFPFLDTKEMVVIDDDRVGPLYEHTFPPSLAPSLSFIGIPRKIIGFPFFESQAIWIAQLLSGKRVLPSWEEMMRSIKEFYHSREVAGIPKHCTHEIANFEYCDKYGEHVGFPRLEEWRKQLCLSAIINSDVNLETYRDSWDDDEQLQEALQSPHFTQLGLEDSPL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0956 457 Gene3D - 11 431 IPR036188 -
Apr1g0956 457 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Apr1g0956 457 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Apr1g0956 457 PRINTS Flavin-containing monooxygenase (FMO) signature 221 236 IPR000960 GO:0050660|GO:0050661
Apr1g0956 457 PRINTS Flavin-containing monooxygenase (FMO) signature 274 301 IPR000960 GO:0050660|GO:0050661
Apr1g0956 457 PRINTS Flavin-containing monooxygenase (FMO) signature 339 352 IPR000960 GO:0050660|GO:0050661
Apr1g0956 457 PIRSF FMO 240 405 IPR000960 GO:0050660|GO:0050661
Apr1g0956 457 PIRSF FMO 7 255 IPR000960 GO:0050660|GO:0050661
Apr1g0956 457 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 4 451 - -
Apr1g0956 457 PANTHER DIMETHYLANILINE MONOOXYGENASE 4 451 - -
Apr1g0956 457 Gene3D - 182 287 IPR036188 -
Apr1g0956 457 SUPERFAMILY FAD/NAD(P)-binding domain 267 415 IPR036188 -
Apr1g0956 457 Pfam Flavin-binding monooxygenase-like 258 393 IPR020946 GO:0004499|GO:0050660|GO:0050661
Apr1g0956 457 Pfam Flavin-binding monooxygenase-like 9 239 IPR020946 GO:0004499|GO:0050660|GO:0050661
Apr1g0956 457 SUPERFAMILY FAD/NAD(P)-binding domain 7 243 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0956 Apr-Chr1 14050796 14053782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0956 - - gmx:100795136 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0956 1 14050796 14053782 Apr1g0956 1 14050796 14053782 ECH