Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0955 ATGGCATTATTGGGCATGAGTGCAAACATGCGATGCAATGGTTATTTCCCAGGATATCATTCCACACGGGATCTTGTCTTAGGCACCGAAGGCAGCTCATGGACCTCATCTAATGGTAACAGTGAACTTAAGAATGACTGTTACCAAATTGGTTCCCTGCCATTGTCATCAACATGTCATCTTTTAGGGTTCAACAAGGAAGTTCTGAAACAGACAATACTCAAGCATGAAGCCATATTTAGGGACCAAATTCATGAGCTTCACCGTATTTATCAGAAACAGAGGGAATTGATGGATGAAATTAAAAGGAATGAGTTACATAAACATAATTTAAGATTGGAAACATCATGGTCCAGTTCCTCTTTGTATTACTCACAAAGCATGCCTCAGTTGGCTGGTCAATCATCTGTTTTAATTGGTAAAAGCATCCCATTGGCTTCTGTGCAAGAAAAGAGCAGGCAATTATGTCCTAATCCTGCTCCAACTGCAATCAAAGAATCTTTAAAAGATTCTAAACTATCAGAGTCTTCTTACAGAAAAGTTGGAAAGAAAATATTGGATCTTCAACTTCCGGCTGATGAGTACATTGATAGTGAAGGTGAATCTTTTGAGAATGAAAGAATTATGAAACAGGCCCCATTGTCAACAGATAATTTAAATGGAATTTCTCAGGTTGTGTATAAGATTGATGCGAAACCATATGGAGTCAATTCTAATGGTTTTACTGACTTAAATTTACCATTTAAGCTTGAAGAGAGTGTGGTGAAGTCTGATGATTTGGGGGGCCAAATCCATCATGGAAACTATACCTTTCATGACATGCCCAGAAGAATGGCATTAGGCTCTCATAATTTGCCCAATGATGCCATCCAGAATTTGAACAAAAGACAGGATCTTGAAGCTTGCTCAGATGTTCCACTACCGAACCAGGGGAAGAAACAAGGATGGCTGTCCTCAGGGAAAAATGATGGTGGCTTCGGTTCTCTTGCTAAATTTAATAATACAGAAAGACTTGGGCCAAGCAGTGCTTCATGCTCGTCTGCTCCATATCAGCTTGTTTCTGAGGCTGATATGACAACTTCTGGGATTTCACCAGCATTGTTATGGAAAAGTATCAAACCTGGCCCTAGTTTAGATTGTCAAAGCTATATTATGAACAGAAACAGTAGGTCCATTCTTTTGGATCTACCATCAGTTAGTGCTAATGATATAAACAGCAGTGACAAACAGGTTTCATCATCAGCTACCCATGAGCTTGGGAAGTATGTCAACGGTTCTAAAGATGTGGGAACTTACAAGAACATAAACCTGAATATTATGCCTGCTGGTTATTCTGATACAGCAGCATTTCAAAGCATTCGGATTACTGGTGAAAAAGATGAATTTCAGGATTCAACTTGTATTGAATCTTTCCTTTTGACTCCTTATAAATCTGGGTATGTACATTCTGATTTGAAGTTAAATAAAGTTGAGAAAAGTAACTCAAAGAGAGACAAGATTCTTGCAATAGACCTTAATGGAAAGCCTCATAGTTCCAAAATATGCGAGAACCTACCAAAAAATCAATTGATTGAAGAAATTAAGAAGATATCTGATGTAAATTCACCTAGTTTCCATGAACCTGACATTGGAGAACAGACACCTGGCCGTGAACATTTCTTGGGGAATGAGAAGAAAAGGCACAAACATTTTGACCTAAATTCATGTATGGATGAGGGTGAGAATATGGCAATTGATACTGATCTGCATGCACCTGAAAGCCCAGAGAACAAGGAGTGTTCTCCACCCAGAGGAGAGTCTGATGAAAACCATCTTGAGATGCCCTTGCAATTGGCAGGAGAGGAGGATCCAGAGGTACAAGAGGAGCAAGCCAAAACTGCAGCTGAGGCTTTGGTTTCCATATCAGGAGTTATTGCCCAAAATGGTGTCCAAATGACAACTTGTCCATCATCTGAATATTTTGTAAGTAGTTCTCTCCACTGGTTTGCTGGAATTGTTTCCACAATAGTGGATCATTTAGAGAGTGAGGTTAAGGTTGATTTCAATGGTACCATTAAGGATCTTGAGGACTTTCTGCCTGCTGACTTTGATTACTTTGAGTTCATGTCCTTAAATTTGACCAAGACAAAAGACCTAGATTGCTGCCACAAGAGTAGTGGCCAAAAAGGGCAAGAAGGTGGATCTACATCACCAACTCAACCAAGAAAATGCCGAGCAAATAAGGGGAGGCGGGGGAAAGACTTTCAAAGTGAAATTCTCCCAAGCCTTGCTTCTTTGTCGCGGTACGAGGTGACTGAAGATCTTCAGACCATAGGAGGTCTCGTGGAAGCTGCTAGAACAAACTCGACAACTGGTTACCTAAAAAGTGCAGGTAGAAATGTTTTGGCTCGGGGGAGGAGAAAGTCTTCTGCTTCAGCCTCTAACATCACAGACTTGCTGTTGAAACTGAAGGAGCTAAATAATATCACTGAAATTGATATGGAGAAAAGGGGGATCATAAGCTGGGGAAAGATTTGTAGAAAGAGAAGGGGCCAGAGAACTCCAACCAGTAAACCCCACTTTATATTTAGCTAA 2574 0.4025 MALLGMSANMRCNGYFPGYHSTRDLVLGTEGSSWTSSNGNSELKNDCYQIGSLPLSSTCHLLGFNKEVLKQTILKHEAIFRDQIHELHRIYQKQRELMDEIKRNELHKHNLRLETSWSSSSLYYSQSMPQLAGQSSVLIGKSIPLASVQEKSRQLCPNPAPTAIKESLKDSKLSESSYRKVGKKILDLQLPADEYIDSEGESFENERIMKQAPLSTDNLNGISQVVYKIDAKPYGVNSNGFTDLNLPFKLEESVVKSDDLGGQIHHGNYTFHDMPRRMALGSHNLPNDAIQNLNKRQDLEACSDVPLPNQGKKQGWLSSGKNDGGFGSLAKFNNTERLGPSSASCSSAPYQLVSEADMTTSGISPALLWKSIKPGPSLDCQSYIMNRNSRSILLDLPSVSANDINSSDKQVSSSATHELGKYVNGSKDVGTYKNINLNIMPAGYSDTAAFQSIRITGEKDEFQDSTCIESFLLTPYKSGYVHSDLKLNKVEKSNSKRDKILAIDLNGKPHSSKICENLPKNQLIEEIKKISDVNSPSFHEPDIGEQTPGREHFLGNEKKRHKHFDLNSCMDEGENMAIDTDLHAPESPENKECSPPRGESDENHLEMPLQLAGEEDPEVQEEQAKTAAEALVSISGVIAQNGVQMTTCPSSEYFVSSSLHWFAGIVSTIVDHLESEVKVDFNGTIKDLEDFLPADFDYFEFMSLNLTKTKDLDCCHKSSGQKGQEGGSTSPTQPRKCRANKGRRGKDFQSEILPSLASLSRYEVTEDLQTIGGLVEAARTNSTTGYLKSAGRNVLARGRRKSSASASNITDLLLKLKELNNITEIDMEKRGIISWGKICRKRRGQRTPTSKPHFIFS* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0955 857 PANTHER GB|AAF67766.1 4 335 - -
Apr1g0955 857 PANTHER GB|AAF67766.1 332 857 - -
Apr1g0955 857 MobiDBLite consensus disorder prediction 581 603 - -
Apr1g0955 857 Pfam Plant protein of unknown function (DUF863) 144 349 IPR008581 -
Apr1g0955 857 Pfam Plant protein of unknown function (DUF863) 562 848 IPR008581 -
Apr1g0955 857 MobiDBLite consensus disorder prediction 721 736 - -
Apr1g0955 857 PANTHER - 332 857 - -
Apr1g0955 857 PANTHER - 4 335 - -
Apr1g0955 857 Coils Coil 84 104 - -
Apr1g0955 857 MobiDBLite consensus disorder prediction 718 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0955 Apr-Chr1 14031208 14037284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0955 - - aprc:113852511 1694.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0955 1 14031208 14037284 Apr1g0955 1 14031208 14037284 ECH