Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0954 ATGGATTGTTCTAACGGTTTTCTGAAAACAAGGTCAAGAGATGTTTCGCTGAAGGAACTTAGCAGAAGGTTGGCTGAGTTTGCTGAAGTGAGAGGATGGGATCAATATCACAGTCCTAGAAATCTTCTTTTAGCTCTTGTTGGAGAGGTGGGGGAGCTATCTGAGATATTCCAATGGAAAGGAGAGGTTGCAAAGGGATTACCCAATTGGAGTTGTGATGACAAAGAACGGTTAGAAGAAGAACTTTCAGATGTATTGCTGTATCTAATTCGTCTTGCTGATGTTTGTGGTCTTGATCTTGGCCAAGCAGCACTAACCAAAATCGTCAAGAATGCTCAGAAATACCCAGTTAGTAACCATACACCCACTTCAACTAGCAACCAACCATGA 390 0.4205 MDCSNGFLKTRSRDVSLKELSRRLAEFAEVRGWDQYHSPRNLLLALVGEVGELSEIFQWKGEVAKGLPNWSCDDKERLEEELSDVLLYLIRLADVCGLDLGQAALTKIVKNAQKYPVSNHTPTSTSNQP* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0954 129 PANTHER - 1 121 - -
Apr1g0954 129 Pfam MazG-like family 49 120 IPR025984 GO:0009143|GO:0047429
Apr1g0954 129 PANTHER DCTP PYROPHOSPHATASE 1 1 121 - -
Apr1g0954 129 PIRSF UCP029826_pph 8 128 IPR025984 GO:0009143|GO:0047429
Apr1g0954 129 CDD NTP-PPase_RS21-C6_like 22 111 IPR025984 GO:0009143|GO:0047429
Apr1g0954 129 Gene3D - 6 120 - -
Apr1g0954 129 SUPERFAMILY all-alpha NTP pyrophosphatases 15 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0954 Apr-Chr1 13924149 13924655 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0954 K16904 - gmx:100527076 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0954 1 13924149 13924655 Apr1g0954 1 13924149 13924655 ECH