Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0938 ATGCCTAGGGTTTCATCGACCCCTTCTCCCTCGCCCTCAGCTTCTATGGCTTCCACCATCAGAGCCTACGCGCTCCCTATTATTCTCTTCGCAGGAGCCATGTTCTACCAGCTTTTTCTCATTCCCAATGCTTTCCCTCCTTCCCATTATGACGTTCTGCAAATTGAGAGGTATAGTTCGGTGGATAAAGTGAAGGAGGCTTACGACAAGCTTGAGTGTAAATGGAATTCGGCTGTGGAAGTTTCTGATATTCATGAGTTTTTAAAGATTCGATATGCCTATGAGTTGCTGACAAATCCACTATGGAAAAGAGACTATGACATCTTTGGCATTGATGAACAGCTTCATATTGTTGAAAGTGCCAGAAAGCATTATGCGGGGAAACGTATTTCAGAATTGGACTTCCCTTTGCTACGTGCCCCTTCTGGATCTATAGATCATTCTTCTAAAGTCATTACTGCTAGTGACTTCCGGTCTATATTTCCGGATACAAAGCCATGGCTAATTCAGTTGTATTCATCGGGGAGTGAACGTTGTGCTCAATTTTCCAAGTCCTGGAATAAGATTGCTTCTTTATTGGATGTTGTTGCAAACACTGGTACGGTGGAACTTGGTGAAAAGGAGCTTGCCGCATACCTTGCTGATAGAAGATCAACAGGAAAACCATTTCTTAGAAATGGAATTCCATCTTTTGTTGCTATTCCTCCTGGATGTCGAGCTGCTAAATGTTTTAGTCGGTTTGATGGCGAGCTTACTGTTGACAAGGTTACAAATTGGTTTGTAACAACTATATTGGATTTACCTCAAATTAACTACTACTCAAAGGAATTGCTGGTGCCAAACTTTCTGGGTAAAACTAGTCATCATAAGGTAAAAGTCATCTTTTTCTCAAAATCGGGGGAGCGTGCTGCTCCATTTATACGACAAGCAGCTAAAGACTATTGGGCTTATGCTTCATTTGCATTCATTCTCTGGCGGGAAGAGGAATCTTCCTATTGGTGGGGAGCATTTGGGGTGGAATCTGCACCTGCTATTGTATTTCTTAAAGACCCAGGTGTAAAACCTGTTGTTCACCATGGTTCAATTAACAATTCTTTATTTTTAAATATGATGGAAAGTAATAAACAGCAAGAGCTTCCTCAGCTAAGAAGTGTGACATCAATGGAGCTAGGCTGTGATCCCCGTGGCTATTCTCGTGCTGGATACGATACGGTTATATGGTATTGTGCCATTGCAGTAGGAAGGCCAAGCTTGGAGTTAAACAAAATGCGTGAAACTATGTGCAGGGTTCAAGAAACATTGTCTAAGCATAGCCACGTGGATGTGTCATCTGAAAATCAATCATTAGCCCCAGCTATTGACGCATTTAAGAGAAGGCGGTTGACATTTGCTTGGCTTGATGGTGAAAAGCAAAAGGACTACTGTCAATTTTACCTTGGTCATGCTGCTAGTGATCACACTTGTGGGCAACGGAAGGGTGTAACTGATATTCCTCGGTTATTTGTTATTCGTTACCTGAGAAATAGTAGTGCTGTTGATTCGCCGGCACAAGAAAAGACAAAGTGGACATCACTACTTGTCCAAGATCTAATTGATGATTCTGATCAGACAGGCCAGTTTGTGGCTGGGTACAAGGATGCAGTTGATGTTTCACAGATAACTCAGTGGCTTGCAAATATTATAGCAGATGGTGACTCAAGAGATTTACCATTCTTTACACTACGAACTCCTAGGCTTGTTCCGGATGAAACCGAACCTATTTGGTCCAAAAGTGTACAAAATATTCCCTTGAAAAATCTGAAGCAGAGTATTCTGGGCGGTGTTAGTGGACTCTCTGTTTACCTTGAGGATCCAAGAGTTGGTCCTTTTCTTCTTCTGGGTGCCTTAATTTCTTTGGGTACCACCTGGCTGCGAAGGAGCCAACAAGTTCAGCTGTCTAAATCAAATCAACCTAGTTCCAATCAGTCATCAGACTCAAACCAACCTAGTTCCAAGGCACCGTCCGAGGATGAAGGAAAACAGAGACCAAGAGACCGAGTCCGGAGTCGGTCAAATAAAAAACCGCCCCCGTCTATGACAGATTTCGAACCATCAGATGCTTACCAAATGCCGCTATCAGATTCTGAATGA 2130 0.4272 MPRVSSTPSPSPSASMASTIRAYALPIILFAGAMFYQLFLIPNAFPPSHYDVLQIERYSSVDKVKEAYDKLECKWNSAVEVSDIHEFLKIRYAYELLTNPLWKRDYDIFGIDEQLHIVESARKHYAGKRISELDFPLLRAPSGSIDHSSKVITASDFRSIFPDTKPWLIQLYSSGSERCAQFSKSWNKIASLLDVVANTGTVELGEKELAAYLADRRSTGKPFLRNGIPSFVAIPPGCRAAKCFSRFDGELTVDKVTNWFVTTILDLPQINYYSKELLVPNFLGKTSHHKVKVIFFSKSGERAAPFIRQAAKDYWAYASFAFILWREEESSYWWGAFGVESAPAIVFLKDPGVKPVVHHGSINNSLFLNMMESNKQQELPQLRSVTSMELGCDPRGYSRAGYDTVIWYCAIAVGRPSLELNKMRETMCRVQETLSKHSHVDVSSENQSLAPAIDAFKRRRLTFAWLDGEKQKDYCQFYLGHAASDHTCGQRKGVTDIPRLFVIRYLRNSSAVDSPAQEKTKWTSLLVQDLIDDSDQTGQFVAGYKDAVDVSQITQWLANIIADGDSRDLPFFTLRTPRLVPDETEPIWSKSVQNIPLKNLKQSILGGVSGLSVYLEDPRVGPFLLLGALISLGTTWLRRSQQVQLSKSNQPSSNQSSDSNQPSSKAPSEDEGKQRPRDRVRSRSNKKPPPSMTDFEPSDAYQMPLSDSE* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0938 709 ProSiteProfiles dnaJ domain profile. 48 110 IPR001623 -
Apr1g0938 709 SUPERFAMILY Thioredoxin-like 149 262 IPR036249 -
Apr1g0938 709 Gene3D DnaJ domain 46 126 IPR036869 -
Apr1g0938 709 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 29 708 - -
Apr1g0938 709 Pfam DnaJ domain 49 107 IPR001623 -
Apr1g0938 709 SUPERFAMILY Chaperone J-domain 39 110 IPR036869 -
Apr1g0938 709 Gene3D Glutaredoxin 146 265 - -
Apr1g0938 709 MobiDBLite consensus disorder prediction 643 709 - -
Apr1g0938 709 CDD DnaJ 49 99 IPR001623 -
Apr1g0938 709 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 29 708 - -
Apr1g0938 709 MobiDBLite consensus disorder prediction 643 667 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0938 - - gmx:100820244 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0938 1 13339192 13384224 Apr1g0938 1 13339192 13384224 ECH