Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0924 ATGAAGTTTGATTTAGTGCTAGTTATTATAATAGCCATAATTTTTGGAGTTGGGTTTGGAGGGTGCGAATACAAGATTGTGCAGTTCATTTTTGGAGACTCCCTCTCGGATGTTGGAAATAACAGGTACCTCTCCAAAAGCCTTGCTCAGGCAAGTTTACCTTGGTATGGTATTGATTTGGGCAATGGACTACCTAATGGGAGGTTCTCTAATGGTCGCACAGTTGCTGATATAATAGGTGACAATATGGGCCTTCCAAGGCCTCCAGCATTCCTGGACCCATCTTTAACTGAAGATGTTATATTGGAAAATGGAGTGAATTTTGCTTCTGGGGGTGGTGGAATATTGAATGAAACTGGCAGTTACTTTATTCAAAGGTTTTCGCTCTACAAACAAATTGAGCTGTTTCAAGGGACACAAGCACTGATTAGAAGCAAAATTGGAAAAGAGGAGGCAGAAAAGTTTTTTCAGGGAGCACGTTACGTTGTTGCTTTAGGCAGCAATGATTTCATCAACAACTACTTGATGCCTGTTTACAGTGATTCATGGACATATAATGATGATACATTCATGAACTACTTGATCGGAACTCTACAAGAACAATTGAAGCTTTTGCATAGCCTAGGAGCAAGGCAGTTGATGGTGTTTGGGCTGGGCCCAATGGGCTGTATTCCCCTGCAAAGGGTGCTTAGTACATCTGGTGATTGTCAAGATAGAACAAACAAGTTGGCTGTTAGCTTTAATAAAGCTGCAAGCAACTTAATAGATGACTTGGGAAAGCAACTTCCTAATTCAAGCTACAGATTTGGAGATGCATATGACGTTGTTAATGATGTGATTAGCAATCCAAACAAATATGGATTCGAAAACTCAGACTCGCCTTGTTGCTCGTTCGGGAATATTAGACCAGCTCTTACATGTATACCTGCATCAAAACTATGCAAAGATAGAAGCAAATATGTTTTCTGGGATGAGTACCATCCATCAGACAGAGCTAATGAACTGGTTGCTAATGAGCTCATCAAGAAATTTAGATTTTTGCGTGTTGATCAAACAAATGCTCCTTCACCATCACCTGTTGTTGCTCCATCTCCACACAATTAA 1104 0.4031 MKFDLVLVIIIAIIFGVGFGGCEYKIVQFIFGDSLSDVGNNRYLSKSLAQASLPWYGIDLGNGLPNGRFSNGRTVADIIGDNMGLPRPPAFLDPSLTEDVILENGVNFASGGGGILNETGSYFIQRFSLYKQIELFQGTQALIRSKIGKEEAEKFFQGARYVVALGSNDFINNYLMPVYSDSWTYNDDTFMNYLIGTLQEQLKLLHSLGARQLMVFGLGPMGCIPLQRVLSTSGDCQDRTNKLAVSFNKAASNLIDDLGKQLPNSSYRFGDAYDVVNDVISNPNKYGFENSDSPCCSFGNIRPALTCIPASKLCKDRSKYVFWDEYHPSDRANELVANELIKKFRFLRVDQTNAPSPSPVVAPSPHN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0924 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 357 - -
Apr1g0924 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Apr1g0924 367 Gene3D SGNH hydrolase 27 345 IPR036514 -
Apr1g0924 367 SUPERFAMILY SGNH hydrolase 151 356 - -
Apr1g0924 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Apr1g0924 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 357 - -
Apr1g0924 367 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0924 Apr-Chr1 12981056 12983298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0924 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.166 1.19e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0924 - - gmx:100796950 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0924 1 12981056 12983298 Apr1g0924 1 12981056 12983298 ECH