Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0921 ATGTCAGAGAAGATCATGGTTCACTCGAGGTTTATATTTTGTGTGATGCTCATTTCTATGTTCCTTTTGGTCCTGTCTTCCCTTTTCCTACTCCAGTTTAGCAGTCATTCTTTGATACCTAGATCAGTTTTAGAGCTTATTCTTGTCAATAATTCGTCACTTTACTTCATGCCCAATTTGAAGAGAGAACAAATTATACTCCCTCCCTACCCTTCTGAGGATTTAAAATTTCAATCTCAAAAAACCAGAGAATCTGACTGTAAAGTTTCCAATTCAAACCAGAAAATAAGTCATGCAGGGCAGCAGATGAATATGGTATCCAACCCAACTCGGGCTCTATTGAGAGTATTCATGTATGACTTGCCTCCAGAATTCCATTTTGGATTATTGGGTTGGAAGGGAAGCATGAATCAAACGTGGCCAGAGGTGGATAACCCCAAACATATTCCACGCTATCCAGGTGGACTGAACTTGCAGCACAGTTTGGAATACTGGCTCACCCTTGATCTTCTGTCATCAAACAATGCAAAGTTTGGCGAACCTTGCACCGCAATTAGAGTTCAGGATTCAAGTCAAGCAGATGTAATATTTGTGCCGTTTTTCTCATCTCTCAGTTACAATCGGCATTCTAAGCTTCATGGAGAGGAAAAGGTTAGTGTTAACAAAATGTTGCAAGACAGATTGGTACAATTCTTAATGGGTCAGAAAGAATGGCAGCGTTCAGGGGGGAAGGATCATCTAATTGTAGCTCACCATCCTAACAGCTTGCTGGATGCCAGAAAAAAGTTAGGTTCAGCTATGCTTGTGCTTGCAGATTTTGGAAGGTATCCTGTTGAATTAGCAAATATCAACAAAGATATAATAGCCCCCTACAGGCACCTAGTAGGAACTATACCAAGAGCAGAATCAGCCTCATATGAAGATCGTACCACCCTGGTGTATTTCCAGGGGGCAATATACAGGAAAGATGGAGGAGCTATTCGCCAAGAACTGTTCTACCTCCTTAAAGATGAGAAAGATGTGCATTTTGCATTTGGGAGCATAGGAGGAAATGGTATTAATCAGGCAAGCCAGGGCATGGCCTTGTCGAAATTCTGCCTCAACATTGCTGGAGATACCCCATCCTCTAATCGCCTCTTTGATGCCATAGTAAGCCACTGTGTTCCTGTGATCATTAGTGACGAAATTGAGCTACCGTTTGAGGATGTCTTGGACTACTCAGACTTTTCCTTATTTGTCCGTGCCTCTGACGCCATAAAGAAAGGCTACTTGCTGAATCTCCTTCGGTCAATCAAGCGCAAGGAGTGGACCAAGATGTGGGAAAGATTGAAGGAGATTACACATCACTTTGAATATCAATATCCATCCCAACCTGGGGATGCAGTGAATATGATTTGGCAGCAAGTTGCAAGAAAGATGTCTTCAATGCGGTTCAATTTGCATAGGAAAAACAGGTACCGAAGATCTCAGCTTGTTAAGACTAACTGA 1488 0.4214 MSEKIMVHSRFIFCVMLISMFLLVLSSLFLLQFSSHSLIPRSVLELILVNNSSLYFMPNLKREQIILPPYPSEDLKFQSQKTRESDCKVSNSNQKISHAGQQMNMVSNPTRALLRVFMYDLPPEFHFGLLGWKGSMNQTWPEVDNPKHIPRYPGGLNLQHSLEYWLTLDLLSSNNAKFGEPCTAIRVQDSSQADVIFVPFFSSLSYNRHSKLHGEEKVSVNKMLQDRLVQFLMGQKEWQRSGGKDHLIVAHHPNSLLDARKKLGSAMLVLADFGRYPVELANINKDIIAPYRHLVGTIPRAESASYEDRTTLVYFQGAIYRKDGGAIRQELFYLLKDEKDVHFAFGSIGGNGINQASQGMALSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSDFSLFVRASDAIKKGYLLNLLRSIKRKEWTKMWERLKEITHHFEYQYPSQPGDAVNMIWQQVARKMSSMRFNLHRKNRYRRSQLVKTN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0921 495 Pfam Exostosin family 113 425 IPR040911 -
Apr1g0921 495 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 485 IPR004263 GO:0006486|GO:0016757
Apr1g0921 495 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 2 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0921 Apr-Chr1 12942699 12945985 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0921 - - gmx:100795371 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0921 1 12942699 12945985 Apr1g0921 1 12942699 12945985 ECH