Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0913 ATGGCTACAAAAGGGAACCCGGGAGATAATAGAAACAATAGGAGTTCAACCTCTATTTTCATTATAGTTGGTTTGTGTGGTTTCTTCTATATATTGGGTTTGTGGCAACGGAGTGGTTTTGGAAAGGGAGACAGCATAGCTGTTGAGATTACTAAACAAACGGATTGCAGTGTTCTCTCTGATCTAAACTATGAGACCCACCACAATGATGATGATGCTGGATCACCAGATAGTTCCAAAGCACAAGTCAAGCACATCAAACCGTGTGATGATCGCTACATAGATTACACACCTTGTCATGATCAGGCACGAGCAATGACATTCCCCAGAGAAAATATGAACTATAGGGAAAGGCACTGTCCTCCTGATGAAGAAAAACTGTATTGTCTTGTACCTGCACCGAGAGGATATGCAACACCATTTCCATGGCCCAAGAGTCGTGATTATGTGCCATATGCAAATGCACCTTACAAGAGCCTGACAGTTGAGAAGGCTGTGCAGAATTGGATACAGTATGAAGGAGATGTTTTCAGGTTCCCTGGTGGCGGAACGCAGTTTCCCAAGGGAGCCGATGCTTACATAGATGAACTTGCGTCTGTTATTCCATTGGACAATGGAATGGTTAGAACTGCACTGGATACAGGCTGTGGGGTTGCTAGTTTTGGTGCATACCTCTTTAAGAAAAATGTTCTTACAATGTCAATTGCACCAAGGGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCGGCAATCATTGGTGTTCTTGGAACAATAATGTTGCCCTTCCCTTCTGGATCTTTTGACATGGCACACTGTTCCCGTTGCTTGATTCCATGGGGTGCAAATGATGGAAAGTACATGAAGGAAGTTGATCGGGTTCTTAAACCTGGTGGTTACTGGATACTTTCTGGTCCTCCTATCAACTGGAAGAATAACTACCAAGCATGGCAACGTCCTGAAGATGAGCTTGAGGAGGAGCAACGACAGATTGAGGACATTGCTAAACTTCTTTGTTGGGAAAAGAAATACGAGAAGGGTGAAATTGCGATCTGGAGAAAACGATTACATTATGATGATTGTGGTGAACAAGATACTCAATCTGCAATGTGTGACACCACAAAGTCTAATGATGTCTGGTACAAGAAAATGGAAAATTGTGTAACTCCGAGTAAACCTAGTGGTTCATGGAAGCCATTCCCTGAGAGACTCAATGTCATTCCTTCCAGAATTTCCAGTGGATCCATTCCTGGTGTATCTGTGGAAGCATTTGAAGAGGACAACCGATTGTGGAAGAAGCATGTGAATGCATACAAACGGATCAACAAAATCCTTGAGTCTGGGAGATACCGCAACATAATGGACATGAATGCTGGTCTGGGAGGTTTTGCTGCTGCTCTGAATTCTCCCAAATTATGGGTTATGAATGTTGTGCCTACAATTGCTGAGAAAGCTAACCTGGCTGTTATATTCGAGCGTGGATTGATTGGCATTTATCACGATTGGTGTGAAGCCTTCTCCACATATCCAAGGACCTATGACCTTATCCATGCAAATGGTGTTTTCAGCTTGTACAAGGATGGATGCAATGTCGAAGACATTCTATTGGAGATGGACCGAATCTTACGGCCTGAAGGAGCAGTGATATTCCGAGATCAAGTGGATGTACTGATGCAGGTGAAAAGAATTGTGAGGGGAATGAGATGGAATACCAAAATGGTGGATCATGAGGATGGTCCACTGGTTTCAGAGAAGGTATTGTTTGCTGTCAAGAAGTATTGGGTTGCTGGTGACAACACCACCAGCACAGTGTGA 1827 0.4346 MATKGNPGDNRNNRSSTSIFIIVGLCGFFYILGLWQRSGFGKGDSIAVEITKQTDCSVLSDLNYETHHNDDDAGSPDSSKAQVKHIKPCDDRYIDYTPCHDQARAMTFPRENMNYRERHCPPDEEKLYCLVPAPRGYATPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGDVFRFPGGGTQFPKGADAYIDELASVIPLDNGMVRTALDTGCGVASFGAYLFKKNVLTMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGSFDMAHCSRCLIPWGANDGKYMKEVDRVLKPGGYWILSGPPINWKNNYQAWQRPEDELEEEQRQIEDIAKLLCWEKKYEKGEIAIWRKRLHYDDCGEQDTQSAMCDTTKSNDVWYKKMENCVTPSKPSGSWKPFPERLNVIPSRISSGSIPGVSVEAFEEDNRLWKKHVNAYKRINKILESGRYRNIMDMNAGLGGFAAALNSPKLWVMNVVPTIAEKANLAVIFERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDGCNVEDILLEMDRILRPEGAVIFRDQVDVLMQVKRIVRGMRWNTKMVDHEDGPLVSEKVLFAVKKYWVAGDNTTSTV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0913 608 Gene3D Vaccinia Virus protein VP39 163 365 IPR029063 -
Apr1g0913 608 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 604 IPR004159 GO:0008168
Apr1g0913 608 PANTHER METHYLTRANSFERASE PMT18-RELATED 2 604 - -
Apr1g0913 608 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 595 IPR004159 GO:0008168
Apr1g0913 608 CDD AdoMet_MTases 210 304 - -
Apr1g0913 608 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 335 IPR029063 -
Apr1g0913 608 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 441 559 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0913 Apr-Chr1 12592901 12598670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0913 - - gmx:100807547 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0913 1 12592901 12598670 Apr1g0913 1 12592901 12598670 ECH