Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0912 ATGGTGGCCGACAAGAGCAAGAAGTTGAAAGTTTCTGACAAAGGCGAGAATGTGGATGATGTCGACGGAGAACTCGTTCTCTCCATCGAGAAGTTGCAGGAGATCCAAGACGAGCTCGAAAAGATCAACGAGGAGGCCAGCGACAAAGTCCTCGAAATTGAACAGAAGTACAATGAGATACGGAAGCCAGTTTATGATAAGCGGAACGATATTATCAAGCGTATTCCTGATTTCTGGTTAACTGCTTTTTTGAGTCATCCTGCTCTTGGTGATCTTTTGAACGAAGAAGATCAGAAGATATTTAAGTATTTGAGTTCTCTTGAAGTTGAAGATTATAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGGATACAAAGCTTGTTAAGACTTATACCTTCCTTGAAGAAGGAACAACAAAGGTTACTGCTACACCCATTAAATGGAAAGAAGGCAAGGGCATACCCAATGGAGTTAATCATGAAAAGAAAGGGAACAAGAGGGCTCCTACTGATGTCAGTTTCTTCAGTTGGTTTAATGACACCGAGCAAAAAGATGATATGGATGACATTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTTACTTATTTCAACAATGGAAAGGATGAGGATGACTCTGAGGACGACGATGACCAAGATGATGACGATGATGAGGGTGAGGAGGAGGGGAAGTGA 741 0.4103 MVADKSKKLKVSDKGENVDDVDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIIKRIPDFWLTAFLSHPALGDLLNEEDQKIFKYLSSLEVEDYKDVKSGYSITFNFNPNPYFEDTKLVKTYTFLEEGTTKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDVSFFSWFNDTEQKDDMDDIHDEVAELIKDDLWPNPLTYFNNGKDEDDSEDDDDQDDDDDEGEEEGK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0912 246 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 243 IPR002164 GO:0005634|GO:0006334
Apr1g0912 246 Gene3D Nucleosome assembly protein 76 223 - -
Apr1g0912 246 Coils Coil 25 59 - -
Apr1g0912 246 MobiDBLite consensus disorder prediction 213 246 - -
Apr1g0912 246 Gene3D - 1 75 - -
Apr1g0912 246 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 243 - -
Apr1g0912 246 MobiDBLite consensus disorder prediction 224 246 - -
Apr1g0912 246 Pfam Nucleosome assembly protein (NAP) 73 220 IPR002164 GO:0005634|GO:0006334
Apr1g0912 246 Pfam Nucleosome assembly protein (NAP) 29 73 IPR002164 GO:0005634|GO:0006334
Apr1g0912 246 SUPERFAMILY NAP-like 7 220 IPR037231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0912 Apr-Chr1 12537949 12544387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0912 K11290 - gmx:100808081 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0912 1 12537949 12544387 Apr9g3009 9 36932631 36936538 ECH
Apr1g0912 1 12537949 12544387 Apr1g0912 1 12537949 12544387 ECH