Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0909 ATGGGATCTGGAGCTGGAAGTTTCATCAAGGTGGTTCTAAAAAATTTTGATGTTCTTGCAGGGCCTGTGCTTAGCCTTGTGTACCCTTTATATGCTTCGGTTAGAGCAATTGAGAGCAGGTCTCCTGTTGATGACCAGCAATGGCTCACTTATTGGGTTCTGTATTCAATGATCACCCTCTTTGAACTTACTTTTGCCAGAGTTCTTGAATGGATTCCTATCTGGCCATATGCAAAGCTGGCCCTAACATGCTGGTTGGTCATTCCTTACTTCAGTGGTGCAGCCTATGTTTATGAGCACTATGTCAGACCCTTCTTTGTTAATCCTCAGAACATTAACGTCTGGTATGTTCCAAGCAAAAAGGACTCCTTGGGTAAGCCAGATGACATTCTAGCTGCTGCAGAGAATTACATTCAAGAGCATGGAACTAAAGAATTTGAGAATATGATCACCAAGGCTGGTAAATCAAGGAAGAATGGTAGTCATGCAATGTATGATAGGAACTATTGA 510 0.4216 MGSGAGSFIKVVLKNFDVLAGPVLSLVYPLYASVRAIESRSPVDDQQWLTYWVLYSMITLFELTFARVLEWIPIWPYAKLALTCWLVIPYFSGAAYVYEHYVRPFFVNPQNINVWYVPSKKDSLGKPDDILAAAENYIQEHGTKEFENMITKAGKSRKNGSHAMYDRNY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0909 169 PANTHER HVA22-LIKE PROTEIN 4 166 - -
Apr1g0909 169 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Apr1g0909 169 PANTHER HVA22-LIKE PROTEINS 4 166 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0909 Apr-Chr1 12418314 12420392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0909 K17279 - gmx:100811647 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0909 1 12418314 12420392 Apr9g3012 9 36969571 36971864 ECH
Apr1g0909 1 12418314 12420392 Apr1g0909 1 12418314 12420392 ECH