Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0878 ATGAAGGGTGTTCTTTCCATCAGCTTCTTGTTTTGTTGCTTGTTTCTGCTTTTGGATTCTTCGATTTCACTTCCACTCTGCGTTGATTCAAGGGCACCCCTTACCCTGAACACGACACTTGGATTTTGTCCTTACAATGGAAGCACATGTTGCAACTCCACAGAAGATGCACAGATAGAGAAGCAGTTCCGAATGAGGAACATATCTGATCCTGGCTGTGCCGCAGTTTTGAAGTCAATACTTTGTGCGAGGTGTGACCCATTTTCAGCAGAGCTATTTACAGTACAATCCTCCCCTAGATCAGTTCCAGTGCTTTGCAATTCCACCATACCAGCAAATTCTTCTCAGTCAAAGACAGCAGTGGAGGACTTCTGCTCTCAAGTATGGGACACGTGTGAAAATGTATCCATAGTGAATTCTCCATTTGCCCCTTCATTACAAGGTCAAGCAGGAGCACCAGTTCATACCAATGCTACAAAATTGACTGATTTATGGCAGTCCAAAACAGACTTTTGCACTGCATTTGGTGGATTATCTGATAATTCATCCATGTGCTTTGACGGAGAACCAGTTTCTCTAAATAAAACTGAGGTTCCTGTTACACCCCCACGTGGCTTGTGCCTTGAGAAAATTGGTAATGGATCTTATCTCAACATGGTGGCTCACCCTGATGGCTCTAACCGTGCATTCTTCTCTAATCAAATGGGTAAGGTCTGGCTGGCAACACTTCCAGATGAGGGATCAGGAGGGAAATTGGAGCTTGATGAATCGAGTCCCTTTGTTGATCTAACTGATCAGGTTTATTTTGCTACCCAATTTGGAATGATGGGCATGGCATTTCATCCAAATTTTGCGCAAAATGGGCGATTCTTTGCTTCATTTAACTGTGATAAATCCAAGTGGTCAGGATGTACTGGAAGATGTTCTTGTAATTCAGATGTTAATTGTGATCCTTCAAAGATTGGTACTGATCAAGGTGCCCAACCATGCCAATATCAAACTGTTATTGCAGAATATTCTGCTAATGGCACAGCATCTCAGCCTTCTATGGTGGAAAATGCTAAACCAACTGAAGTGAGAAGAATATTTACCATGGGCCTCCCATTTACAGGTCAACATGGAGGTCAAATACTCTTTGGACCTGATGATGGGTATTTATACTTCATGATGGGATATGGAGGAGGTTCAGGTGATCCATACAATTTTGCACAAAACAAGAAATCTCTTCTTGGAAAGATTATGAGGCTTGATATAGACAACATCCCTAGTGCAGAAGAAATTAGTAAACTTGGGCTTTGGGGTAACTACTCCACTCCAAAGGACAATCCATTTAGTGAAGATAAAGATCTGCAACCTGAAATATGGGCCTTGGGACTAAGGAATCCTTGGCGCTGCAGTTTTGATGCAGAAAGACCTTCCTACTTTTTGTGTGGAGATGTTGGACAGGATGTTTATGAGGAGGTGGATCTCATCACAAAGGGTGGAAACTACGGCTGGCGTGTTTATGAGGGTCCCAATCTATTCCACCCTACACAATCACCTGGAGGAAATACTTCCCTAAAATCCATTAATCCAATTTTCCCAATATTTGGATACAAACATACTGAAATAAACAAGAATGAAGGATCAGCATCCATTACCGGAGGATATATGTATCGATCTACCACTGATCCTTGCATGTATGGAAGGTACGTGTTTGGGGATCTGTATGCGGAAGCAATGTGGGCAGGGACAGAGGAGCCAGAAAACAGTGGAAATTTCAGCACTAGCAGAATTCCATTCAGTTGTGCAAGTGATTCTCCAATACAATGTGACGCAGCACCTGGAAACTCTCTTCCTGCTTTAGGCTACATCTATTCATTTGGTGAAGACAAGAAGAAAGATGTTTATGTCCTTGCAAGCACTGGCGTTTACCGCATTGTTCGTCCGAGTCGTTGCAGTTATGTTTGCTCACTGGAAAAGGCAACAACTACTACAACCTCACCCCCTTCTCCTTCTCCTTCTCATGCTGGCCATAGAAGTAACCTCTCTCTATATATGTTTTTGCACTTTTCATCTTTGTTGTTGCATTTGTTGGGTTTCATGTAG 2088 0.4262 MKGVLSISFLFCCLFLLLDSSISLPLCVDSRAPLTLNTTLGFCPYNGSTCCNSTEDAQIEKQFRMRNISDPGCAAVLKSILCARCDPFSAELFTVQSSPRSVPVLCNSTIPANSSQSKTAVEDFCSQVWDTCENVSIVNSPFAPSLQGQAGAPVHTNATKLTDLWQSKTDFCTAFGGLSDNSSMCFDGEPVSLNKTEVPVTPPRGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQMGKVWLATLPDEGSGGKLELDESSPFVDLTDQVYFATQFGMMGMAFHPNFAQNGRFFASFNCDKSKWSGCTGRCSCNSDVNCDPSKIGTDQGAQPCQYQTVIAEYSANGTASQPSMVENAKPTEVRRIFTMGLPFTGQHGGQILFGPDDGYLYFMMGYGGGSGDPYNFAQNKKSLLGKIMRLDIDNIPSAEEISKLGLWGNYSTPKDNPFSEDKDLQPEIWALGLRNPWRCSFDAERPSYFLCGDVGQDVYEEVDLITKGGNYGWRVYEGPNLFHPTQSPGGNTSLKSINPIFPIFGYKHTEINKNEGSASITGGYMYRSTTDPCMYGRYVFGDLYAEAMWAGTEEPENSGNFSTSRIPFSCASDSPIQCDAAPGNSLPALGYIYSFGEDKKKDVYVLASTGVYRIVRPSRCSYVCSLEKATTTTTSPPSPSPSHAGHRSNLSLYMFLHFSSLLLHLLGFM* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0878 695 Gene3D - 212 628 IPR011042 -
Apr1g0878 695 Pfam Glucose / Sorbosone dehydrogenase 222 504 IPR012938 -
Apr1g0878 695 PANTHER HEDGEHOG-INTERACTING PROTEIN 1 691 - -
Apr1g0878 695 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 200 511 IPR011041 -
Apr1g0878 695 PANTHER HIPL1 PROTEIN-LIKE 1 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0878 Apr-Chr1 11783424 11788042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0878 - - gmx:100778890 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0878 1 11783424 11788042 Apr9g3046 9 37260481 37264603 ECH
Apr1g0878 1 11783424 11788042 Apr1g0878 1 11783424 11788042 ECH
Apr9g3046 9 37260481 37264603 Apr1g0878 1 11783424 11788042 PCT