Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0870 ATGGCTAGTCGATCATTTTCTCATTTTGTGGAGCAAGAAATGGGGAAGTTTCCTCACTTTGTGATCTATGTGTTGCTTGAATGGGTTTTGATAATCATTCTTTTCCTTGACGGGTTCCTCGCGTTTATTGCCAATGAGTTTGCCATGTTCTTTGAATTGCAAATCCCATGTTGGCTTTGCACTAGGTTTGATCATGTAATGGCTCATAGAAATCCTGATTTTTATTACAATGAGTCTGTGTGTGAGACTCATAAGAAAGACATGTCCTCTTTGGCTTTTTGTCACAACCACAAGAAGCTCTCTGATATAAGGAAGATGTGTGAGGGGTGTCTACTTTCTTTTGCAACTGAAAAGGAATCAGATTGTGACACCTACAAGTCCCTTGTGGGGATTTTGCATAAGGATCTTGAGTGCTTTGTTCAGGATGGCCAACCAATTCAATTGAGTTTGAAGGATGATGGGTTCATGCATGTTGATACAAGCAGCACTCAAAGATGTTCTTGCTGTGGAAAACCATTGAAAGTCAAAGCTTCCTATGTTAAAGGGAAGCGCTCAGCATCATTTGCTAGAGCCCCAACTCCTTCACCACGAGCTTTTCCATATTCAACATCCAAAAGTGAGGATCATCATGGTCTAGAGTTACCTCACATCAGGTACACAGAACTCAAGTTTATGTCAGATGATTCAGAGCTTCCAGAGGATGAGGATAGCTTCAATGCGAATAAGGATTTGAATGATGAGTCCAGCAAATTCACCCCAACTTTTACAAAGAGCAATAAGTTCTTTGGAATCCCACTCACAGATTCTGCAAACAACAGTCCCAGATGGTCTTACAGGATTGCCAGGAAATCACCACTGGAGAAAACAGAATTTGCCTCAGACTCTAATGAGGCAAATGTTCAAAATGATGCTGATGAAGCCATCTTGAACAACTTGAAGAGGCAAGTTCGATTGGACCGCAAATCACTCATGGCTTTGTACATGGAGCTGGATGAGGAAAGAAGTGCTTCAGCTGTTGCTGCTAACAATGCTATGGCCATGATCACGCGGTTACAGGCAGAGAAGGCTGCAGTGCAAATGGAAGCTTTGCAGTATCAAAGAATGATGGAGGAGCAAGCTGAGTATGATGAAGAAGCACTCCAAGCATGTAATGATATGCTTCTCAAACGTGAGGAAGATATGAAATCTTTAGAAACAGAGTTGGAAATTTATAGAAAAAAGTATGGATCTTTAGTAGAAGAATATGCTAACTCATCTCTTGGAGACAATGGCTTTTCACTCAGGCTCAATGAAGGTGAAGATAATAATGGAGAAAAGAGCTTCAACTATAATCAAGTTGTGTCATCTCCAGCAAAACATGGAGGGGTAAAACACAGTGATTCTTTCAAAGAGATTATGGCGGAGAGAACATATCTTCTTGGCCGGTTGAAGAAAATAGAACCTAGGACACCCTTTGCAGAAAATATTGAGACAGGAAAAGGGAGCGAAGCCTATTTACCAAAAGAACTGTCCTTCCTTGCTGAAAGGGTGAAGGCTCTTGAAGCCAACAGTGGTTTCTTAGAGCTTGTTTCCAAGAAAGATGAGAATGATAGTGAAGGAACCGAAATTTTGACAGTGATATCACAGAATCTAGAGAAGCTCAACAACCTTGTTATGACCTCCTTTGAGGACATGCACGATGCCCGTTTTTCCTTTGGTGGTAATTGA 1707 0.4118 MASRSFSHFVEQEMGKFPHFVIYVLLEWVLIIILFLDGFLAFIANEFAMFFELQIPCWLCTRFDHVMAHRNPDFYYNESVCETHKKDMSSLAFCHNHKKLSDIRKMCEGCLLSFATEKESDCDTYKSLVGILHKDLECFVQDGQPIQLSLKDDGFMHVDTSSTQRCSCCGKPLKVKASYVKGKRSASFARAPTPSPRAFPYSTSKSEDHHGLELPHIRYTELKFMSDDSELPEDEDSFNANKDLNDESSKFTPTFTKSNKFFGIPLTDSANNSPRWSYRIARKSPLEKTEFASDSNEANVQNDADEAILNNLKRQVRLDRKSLMALYMELDEERSASAVAANNAMAMITRLQAEKAAVQMEALQYQRMMEEQAEYDEEALQACNDMLLKREEDMKSLETELEIYRKKYGSLVEEYANSSLGDNGFSLRLNEGEDNNGEKSFNYNQVVSSPAKHGGVKHSDSFKEIMAERTYLLGRLKKIEPRTPFAENIETGKGSEAYLPKELSFLAERVKALEANSGFLELVSKKDENDSEGTEILTVISQNLEKLNNLVMTSFEDMHDARFSFGGN* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0870 568 Pfam Zein-binding 311 401 IPR007656 -
Apr1g0870 568 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 553 - -
Apr1g0870 568 Coils Coil 341 368 - -
Apr1g0870 568 PANTHER MYOSIN-BINDING PROTEIN 2 1 553 IPR039306 GO:0017022
Apr1g0870 568 ProSiteProfiles GTD-binding domain profile. 307 405 IPR007656 -
Apr1g0870 568 Coils Coil 380 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0870 Apr-Chr1 11630618 11633712 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0870 - - gmx:100817859 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0870 1 11630618 11633712 Apr1g0870 1 11630618 11633712 ECH