Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0867 ATGCCTCGTCCCTCTACAACCGCAACGCAAAACATAAAGCAGAGGGTTCTCACGTGCCTGACGAAGCTTTCGGACCGTGATACGCACGCTCTTGGAGCCACGGAGTTAGAGACCATTGCTCGAACCATAGACCAAAATTCAGTGTCAGTGTTCCTCTCTTGCATTCACTCCACCGACGCTTCGGACAAAACACCCGTTCGCAAACAATGTGTGCACCTCGTCGCCATTCTCTCCGAGGCGCACGGCAACGCACTCTCTCCCTTCCTCTCCAAAATCCTTGCCAACATCGTGCGCCGCCTCCGCGACCCCGACTCGTCGGTTCGAGCCGCGTGCGCCGATTCCGTTTCGGTGTTGTCGGCGTGCGTCACGAAGCAGCCGTTTTCGTCCTTTCTGAAGCCGTTGGCTGAGGCGCTGTTCACGGAGCAGGATCCGAACTCGCAGGCTGGCGCTGCTATGTGTCTGGCTTCGGCGATTGATGGAGCTCCGGATCCGGACCCCGCCAGGCTGGCCAAGCTCCTCCCGAGGTTCGAGAAGCTTCTCAAGTGCAAGGTGTTTAAGGCCAAGGCGGCACTGCTTGTGCTCATTGGAAGCGTCGTCGGGGCCGGTGGCGCGTCGAGTCGCGGCGCGTTGACGAACCTCGTTCCTTGTTTGGTGGAGGCGTTGAGCAGCGACGATTGGGCTACCAGGAAGGGTGCAGTTGAGGCGTTGATGAAACTGGCGATAGTGGAGAGGGACTCGTTGTCGGAATTCAAGGCTGGGTGTTTGAAACTTTTCGAGAATCGGCGATTTGATAAGGTGAAGTTGGTTCGGGAAGTTATGAATCAGTTGTTGGATGCATGGAAGCAGATTCCTGATGTTTCGGATGAATTCTCTCCACCTCCTCAATCGCAGTCTTCTTCCAAGGAGAATGCAAGTGATGGGCGCTATCCACATGTCTCTCAAAATTCTTGTAGCCCTGGTTCTGTAATGACTAAATTGAGGAGGAAATCGAGTCCAGTAAGCAAATCAACTCCACCAGATAGATCTACTGCTAGGAATGCTAAAAAGATGAGTGCATTAAGTGATAATCAAATGAGTTCAGGTGTTTTGCGTAAACTGAACCATAACAATTGGGATGTTCAAATTGCTGTGTCAAATGTTCCTGATCATGGTGAACTTCAGCGGAGGGATGAAACAGTTTTGGAAAGAAGCAAAAAGGATAAAAGCAGATTTTTTAAGTCCGAAGCAAGACGGGCTCTATTTGATAAAACTCCTGATGACAAGATTCATAAATTTGGTGGGTCCAAAGGTGGATCTCGTGTGGTTCCTTGTTCTGAAGAGAGTCAAGACTCAGGTCCTGTTGGTAATGTCACCAAAGATGTCCATAGGAATGACAAAGAGAGTGAGGATTTATCTTTGATTCGCGCCCAATTACTTCAAATTGAGAAGCAGCAGTCAAGTCTGCTTGATCTTCTACAGAAATTCATTGGGAGTTCTGAAAATGGAATGCGATCTTTAGAGACTCGTGTGCATGGCCTTGAATTGGCATTGGATGAGATCTCCTATGATTTGGCTGTGTCAACTGGAAGGATGACTAAAGATGATGCTCCTAGGCATACGTGTTGCCTGCTACCTGGTGCCGAATTTTTAAGCTCCAAATTCTGGAGGAAAACACAGGGCAGGTATTCATCCCACCGATTCTCTACATCTGGTGGCACCCCATCATTAGCTTCCATTCATCACAGAGCCAATAGGAATGCTGAAACTAATTTGACAAGCCACAGATTTAGGGTCCGGGGTGATGGAAGCTTCATCACTAATCCTCTGGCAGAGATTAAAACTAATTCAAGGGAGATTTCAGGCTCTGCAAGATCAGAGCTAGCTTAA 1866 0.492 MPRPSTTATQNIKQRVLTCLTKLSDRDTHALGATELETIARTIDQNSVSVFLSCIHSTDASDKTPVRKQCVHLVAILSEAHGNALSPFLSKILANIVRRLRDPDSSVRAACADSVSVLSACVTKQPFSSFLKPLAEALFTEQDPNSQAGAAMCLASAIDGAPDPDPARLAKLLPRFEKLLKCKVFKAKAALLVLIGSVVGAGGASSRGALTNLVPCLVEALSSDDWATRKGAVEALMKLAIVERDSLSEFKAGCLKLFENRRFDKVKLVREVMNQLLDAWKQIPDVSDEFSPPPQSQSSSKENASDGRYPHVSQNSCSPGSVMTKLRRKSSPVSKSTPPDRSTARNAKKMSALSDNQMSSGVLRKLNHNNWDVQIAVSNVPDHGELQRRDETVLERSKKDKSRFFKSEARRALFDKTPDDKIHKFGGSKGGSRVVPCSEESQDSGPVGNVTKDVHRNDKESEDLSLIRAQLLQIEKQQSSLLDLLQKFIGSSENGMRSLETRVHGLELALDEISYDLAVSTGRMTKDDAPRHTCCLLPGAEFLSSKFWRKTQGRYSSHRFSTSGGTPSLASIHHRANRNAETNLTSHRFRVRGDGSFITNPLAEIKTNSREISGSARSELA* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0867 621 MobiDBLite consensus disorder prediction 422 453 - -
Apr1g0867 621 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 9 615 - -
Apr1g0867 621 Gene3D - 2 380 IPR011989 -
Apr1g0867 621 MobiDBLite consensus disorder prediction 289 355 - -
Apr1g0867 621 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 9 615 IPR033337 GO:0005874|GO:0008017
Apr1g0867 621 SUPERFAMILY ARM repeat 12 377 IPR016024 -
Apr1g0867 621 MobiDBLite consensus disorder prediction 286 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0867 Apr-Chr1 11551534 11555793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0867 - - gmx:100778310 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0867 1 11551534 11555793 Apr1g0867 1 11551534 11555793 ECH
Apr9g3057 9 37375150 37378549 Apr1g0867 1 11551534 11555793 PCT