Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0866 ATGGCTGGAGGATCGCTTGGAGACAGCATAGGATTGAAAGAAGAGATCATTAAGAAGACGTGTGGTTTGGCCTTCAAAGCTCACAAGGCACCGGAGAGGCCCTATATTCGCACTTCTTTGGACCATTATGTTGTTTTCAGCTTCCCTGGTTCCTGGGATGCCACTGAATGGTTCGTTAACAAACTTTTCGGAGAAACCAAGGTAGATCTTACCCTCTTCCCTTCACTTAGAAGTGTTGGTAATGATGAAGCTGCTTGGGTCAACGAAGGCTTTTCAAACAGATTCGATCACATACTCAATAACAGCTCAATGAAATCCGAGGTGCATAAAGCTATGTCAGATGGGAAACAAGTAGTGTTTACCGGGCACTCCTCTGGTGCTGCAGTGGCCATTCTTGCAACGTTTTGGGCCTTGGAAGAGTACCTTAACCCAACCAAAACCCGAAACCAAAAGCCTCCCCTATGTGTCACTTTTGGGTCCCCATTAATTGGTAATCATATATTCTCTCATGCTTCAAGGCGTGAAAATTGGTCTAGCTATTTTATACACTTTGTTTTGAGATTTGACATAGTGCCGCGGATTTTGCTTGCTCCCTTCTCTTCTATTGAGAAAACTTTTAGCTCAATTCTCGAATTCTTGAACCCCAAGTTGAAATCTTCCACCCAAATTTTAGACAGTTTGAGTTCTGAATTTTACTCAACTGTGATGAGGAATGCAGCAACTGTTACAAGCCATGCTGCTTGTGTTCTCATGGGAAGCACTAATTTGTTGCTTGAGACGGTGACATATTTTGTTGACTTAAGCCCTTATAGGCCCTTTGGAACATACATTTTTTGCAACGGAAATGGACAGTTAATTGTGGTGAAAAACTCGGATGCTGTTTTGCAACTCATGTTCCACACTGCTCAGCTAAGCAATTTGCAAGAACTTTCTGAGGTTGCTAAGAATAGCATACTGCAACATCAAGTATATGAGGCTGAATTGGAGGATAGCTTGGGAATGCAGAATGTGGTGTACTTGGAGAAACTTGAGGAACTTCCCTTGTCTGCTGATGGCCCTAATAGTGATATTGTAACAACTAGCGCAGCATTGGATGGCCTTGGACTGAGCACAAGAGCAAGACTATGCCTTAGAGCAGCTGGTGAGTTGGAGAAACTAAAGCGCAGAAATGAGGACAAAATCATTAAGGAGATTAAGGATAAAGCTGTGGGAAGCATGAGGGATCTTGAAAATTACAGGACGACATGTGAGTTACATAGGGGCAAGGGCTATTATGATGCTTTCAAGGTGCAGAAGGAGGCAAATGACTTCCAAGCAAATGTGAAGAGGCTTATATTGGCAGGGGTGTGGGATGAGATCATTGAGATGCTGAAGAGGTATGAACTCCCTGATGAGTTTGAAGGCAAGCCAGATTGGATCAAGCTTGGAACTGAATTTCGTCGCCTTGTGGAACCTTTAGACATTGCCAACTATTATCGCCATTTGAAGAATGAAGACACTGGACCTTACATGATCAGGGCCAGGCCGAAACGGTATAGATACACTCAAAGATGGTTGGAACATGCCATGAGGGTGCCTAAAAGAAATATCTCTGAATCCACCTTCTGGGCTGAATTAGAGGAGCTTTTGAGCTCGATTAATAACAAGAAACCTTTTGAAGAAGTCAAGGAGAGGGTTCTGCAACTTGAAGAAGATATTAAAAAGTGGACTGATGACTTGGTGCTAACCAAGGAAATGTTCTTAAAGGATCCTACCTTTGTTAAGTGGTGGGAAATTCTACCCAAGGAACACAAGGCCAAATCCTGCCTTTCAAGTCTATTGTGA 1824 0.4304 MAGGSLGDSIGLKEEIIKKTCGLAFKAHKAPERPYIRTSLDHYVVFSFPGSWDATEWFVNKLFGETKVDLTLFPSLRSVGNDEAAWVNEGFSNRFDHILNNSSMKSEVHKAMSDGKQVVFTGHSSGAAVAILATFWALEEYLNPTKTRNQKPPLCVTFGSPLIGNHIFSHASRRENWSSYFIHFVLRFDIVPRILLAPFSSIEKTFSSILEFLNPKLKSSTQILDSLSSEFYSTVMRNAATVTSHAACVLMGSTNLLLETVTYFVDLSPYRPFGTYIFCNGNGQLIVVKNSDAVLQLMFHTAQLSNLQELSEVAKNSILQHQVYEAELEDSLGMQNVVYLEKLEELPLSADGPNSDIVTTSAALDGLGLSTRARLCLRAAGELEKLKRRNEDKIIKEIKDKAVGSMRDLENYRTTCELHRGKGYYDAFKVQKEANDFQANVKRLILAGVWDEIIEMLKRYELPDEFEGKPDWIKLGTEFRRLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYTQRWLEHAMRVPKRNISESTFWAELEELLSSINNKKPFEEVKERVLQLEEDIKKWTDDLVLTKEMFLKDPTFVKWWEILPKEHKAKSCLSSLL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0866 607 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 606 - -
Apr1g0866 607 Pfam Lipase (class 3) 45 195 IPR002921 GO:0006629
Apr1g0866 607 Gene3D alpha/beta hydrolase 12 245 IPR029058 -
Apr1g0866 607 Pfam Enhanced disease susceptibility 1 protein EP domain 408 605 IPR041266 -
Apr1g0866 607 Coils Coil 552 572 - -
Apr1g0866 607 PANTHER PROTEIN EDS1-RELATED 1 606 IPR044214 GO:0006952
Apr1g0866 607 SUPERFAMILY alpha/beta-Hydrolases 42 199 IPR029058 -
Apr1g0866 607 CDD Lipase_3 44 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0866 Apr-Chr1 11528130 11531105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0866 11 208 Acyl Lipid Metabolism Gene Families AT5G14930 30.542 1.74e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0866 K18875 - gmx:100778851 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0866 1 11528130 11531105 Apr1g0866 1 11528130 11531105 ECH