Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0855 ATGGAACCATCATTTCTCGCCATAATTCTCTTCTTCGTCTTTTCAATTCCTTTTTCTTCGTCTTCCACCGTCGGTGTTGACTCTATCTCTCGCCTTATTGAAATCCAAGACCGTGAGAGAGCTCCACCTTCCGTTCAAGAAGCCGCCGCGCACGGCGTCCTCCACCGCGTGCTTCCTTCTCATTCCTCCAGCTTCCACTTCCGCATCGTCTCCAAGAAGCAATGTGGTGGTGAATATTGCTTCGTGATAAAAAACCATCCTTCTTCCGCAACACAAGGGGATCCTCAAATTCTAATCGAAGGGGCAACAGGAGTGGACATTGTGGCTGGTCTGCACTGGTATCTGAAGCATTGGTGCAGTTCACACATATCATGGGACAAAACCGGTGGCTCCCAACTATTTTCCGTACCCAACGCGCGGTTTCTCTCGCGTGTTCACGACGCTGGAGTCTCTGTTCGGAGGCCTATTCCCTGGAGCTATTATCAAAATGCTGTTACCTCAAGCTATTCTTTTGCTTGGTGGGACTGGAAAAGATGGGAAAAGGAAATTGACTGGATGGCTCTGCAGGGTGTCAACTTGCCACTTGCATTCACGGGACAAGAGGCTATCTGGCAGAAAGTGTTCCAGAAATTTAACATGAACATTTCTGATCTGGATGATTTCTTTGGAGGCCCCGCATTTCTTGCATGGTCACGTATGGGAAATTTACATGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATCAACAATTAATCTTACAGAAGAAAATTCTTGCCAGAATGTATGAGCTTGGAATGACACCAGTCCTGCCAACTTTTTCTGGAAATGTCCCTGCTGCACTGAAGTATATATTTCCATCAGCAAAAATAACACGCCTAGGAAATTGGTTTACTGTTAAGAATGACCTCAGATGGTGCTGCACTTATCTTCTTGATGCAACTGATCCTTTGTTCGTTGAGATTGGAAAAGCATTTGTTGAGCAGCAACTGCAAGAGTATGGACGAACCAGCCATGTATACAATTGTGATACTTTTGATGAGAACACCCCGCCGATTGATGATCCAAAGTACATTTCATCATTAGGGGCTGCAATCTTTAAAGGAATGCAGAGTGGTGATGATGATGCTGTTTGGCTGATGCAGGGATGGCTATTTTCCTATGATCCTTTCTGGAGACCTCCTCAAATGAAGGCCCTTGTACATTCTGTGCCGGTTGGAAAGCTGGTAGTTCTTGACCTGTTTGCCGAAGTAAAACCCCTGTGGGTTACCTCAGAACAGTTTTATGGAGTTCCCTACATCTGGTGTATGCTGCACAATTTTGCTGGGAATGTTGAGATGTATGGGATATTGGACGCGATAGCATCAGGGCCAATTGACGCACGTACAAGTACTAACTCAACAATGGTTGGAGTTGGAATGTCAATGGAAGGTATAGAACAGAATCCCATTGTCTATGATTTGATGTCTGAAATGGCATTTCAACACAAGAAAATTGATGTTAAGGCGTGGGTTGATATGTATTCAACTAGACGATACGGACAACGACTTCCTTTGATGCAAGAGGGATGGAATGTCTTATATCACACCATTTACAATTGCACTGATGGAGCCTATGACAAAAACAGAGATGTTATTGTAGCATTCCCAGATGTTGATCCTTCCTTAATTTCAATAGAGCATGGATGGACTGGGCACTATGAAAAACCCTACTCAGCAACAATAATCAAGGAAATAACTGATCCATTTGATCAACCCCATTTATGGTATTCAACTTCTGAAGTAATTTATGCATTACAGCTATTTATAGCTAGTGGAGGAGATGAACTTTCAAGAAGTAATACTTACAGGTATGACCTTGTTGATCTGACTAGACAAGTCTTGGCAAAATATGCAAATGAATTGTTCTTTAAGGTCATAGAAGCATACCAATCGCATGATGTCCATGGAGTGACCCTCCTCAGCCGGAGATTTCTGGACCTAGTGGAAGATCTGGACACACTGTTGGCTTGCCATGATGGGTTTCTTCTGGGACCATGGTTAGAAAGTGCAAAGCAACTAGCTCAAAATGAAGAACAGGAGAGACAGTTTGAGTGGAATGCTAGAACACAAATCACCATGTGGTTTGACAACACAGAGGAGGAAGCCAGTCTGCTTCGTGATTATGGAAACAAGTACTGGAGTGGACTTCTACATGATTACTATGGCCCTAGAGCTGCTATATATTTTAAATATTTAAAAGAGAGTTTAGAGAGAGGCGAGAATTTCAAGCTAAAGGAATGGAGGAAGGAGTGGATAAAGCTTACTAATGAATGGCAAAGCCGAAGGAACATATTTCCAGTGGAAAGTAGGGGAGATGCTCTAAACACTTCTCGGTGGCTCTTTAACAAATATCTGAACCTGAGAAATCCTGCAACGAAGCTTACACTGGAGTATTGGAATGGACCCAAATCAATGACATTTCAATGA 2469 0.4342 MEPSFLAIILFFVFSIPFSSSSTVGVDSISRLIEIQDRERAPPSVQEAAAHGVLHRVLPSHSSSFHFRIVSKKQCGGEYCFVIKNHPSSATQGDPQILIEGATGVDIVAGLHWYLKHWCSSHISWDKTGGSQLFSVPNARFLSRVHDAGVSVRRPIPWSYYQNAVTSSYSFAWWDWKRWEKEIDWMALQGVNLPLAFTGQEAIWQKVFQKFNMNISDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPTFSGNVPAALKYIFPSAKITRLGNWFTVKNDLRWCCTYLLDATDPLFVEIGKAFVEQQLQEYGRTSHVYNCDTFDENTPPIDDPKYISSLGAAIFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKALVHSVPVGKLVVLDLFAEVKPLWVTSEQFYGVPYIWCMLHNFAGNVEMYGILDAIASGPIDARTSTNSTMVGVGMSMEGIEQNPIVYDLMSEMAFQHKKIDVKAWVDMYSTRRYGQRLPLMQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISIEHGWTGHYEKPYSATIIKEITDPFDQPHLWYSTSEVIYALQLFIASGGDELSRSNTYRYDLVDLTRQVLAKYANELFFKVIEAYQSHDVHGVTLLSRRFLDLVEDLDTLLACHDGFLLGPWLESAKQLAQNEEQERQFEWNARTQITMWFDNTEEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLKESLERGENFKLKEWRKEWIKLTNEWQSRRNIFPVESRGDALNTSRWLFNKYLNLRNPATKLTLEYWNGPKSMTFQ* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0855 822 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 160 495 IPR024733 -
Apr1g0855 822 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 49 133 IPR024240 -
Apr1g0855 822 Gene3D Glycosidases 155 496 - -
Apr1g0855 822 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 39 800 IPR007781 -
Apr1g0855 822 Gene3D - 498 807 - -
Apr1g0855 822 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 39 800 - -
Apr1g0855 822 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 504 797 IPR024732 -
Apr1g0855 822 Gene3D - 21 142 IPR029018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0855 Apr-Chr1 11388812 11407107 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0855 K01205 - gmx:100791160 1495.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0855 1 11388812 11407107 Apr1g0855 1 11388812 11407107 ECH