Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0852 ATGAAGCCTTATAGCATCTTTGGTGACACCATTGTATTTGATGGTATCCGTGAGTCAGAGAAACTTTTTCAGATGAAGGTGGGGGTCTTCGTCAGAGGAAATCAATACACCAGAGGCAGCTGCTTCTTCATTAATGTTCAGCTTGATTGGTTTAAGAAGATCAAACCTTCCCTTTGTCAAAACAAAGAAGAGTGCAAAGATTTATTCAAGAAATCATTGTTTCTGGTTGGAGAGATTGGTGGGAATGATATCAATGCACTTCTACCATATAAAAATATTACAAAACTTCGAGAATTGGTTCCACTAATTATTGAAGCAATTACGAATACCACCACTAAAATAATTGAAGAAGGAGCAGTAGAGGTAGTGGTGCCAGGAAACTTCCCAATTGGGTGCAATTTTGCCGTTTTGACAATAATGAATAGCGATAACATAAATGACTATGATCAATTCGGGTGCTTGACTGCTTACAATACTTTCATTGAGTATTATAATGGACAACTCAAACAAGCCATAGAGACTTTAGGACAAAAGAACCCACAGGTTAATATAATATATTTTGACTACTATGGTGCTGCCAAACGTCTATTCCAGGCTCCGCAACAATATGGTTTTTCTTCTGATAAGAAAGAGACTTTAAGAGCATGTTGTGGAAAAGGTGAACCATACAATGTTGATATAAACATATTTTGTGGAAGTGCTGCCTCCACCGTTTGTTCAGATCCTTCAAAACACATCAATTGGGATGGAGCGCACTTTACTGAAGCAGCATATAGGCAAATTGCAAAGGGACTTGTTGAGGGCCCTTTTGCAAATCCTTCTCTTAAATCTCCTCGTTCAAAGATAGCTTGA 852 0.3803 MKPYSIFGDTIVFDGIRESEKLFQMKVGVFVRGNQYTRGSCFFINVQLDWFKKIKPSLCQNKEECKDLFKKSLFLVGEIGGNDINALLPYKNITKLRELVPLIIEAITNTTTKIIEEGAVEVVVPGNFPIGCNFAVLTIMNSDNINDYDQFGCLTAYNTFIEYYNGQLKQAIETLGQKNPQVNIIYFDYYGAAKRLFQAPQQYGFSSDKKETLRACCGKGEPYNVDINIFCGSAASTVCSDPSKHINWDGAHFTEAAYRQIAKGLVEGPFANPSLKSPRSKIA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0852 283 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 42 283 - -
Apr1g0852 283 Pfam GDSL-like Lipase/Acylhydrolase 67 263 IPR001087 GO:0016788
Apr1g0852 283 Gene3D SGNH hydrolase 27 268 IPR036514 -
Apr1g0852 283 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 42 283 - -
Apr1g0852 283 SUPERFAMILY SGNH hydrolase 76 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0852 Apr-Chr1 11282556 11285938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0852 121 268 Acyl Lipid Metabolism Gene Families AT4G10950 30.405 1.10e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0852 - - ccaj:109813032 386.726