Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0849 ATGGCGCCACGCGTGCTTCTTGTATTGGGGATGTTGCTCCTCACGTGCCTTGTTAAGGTTTCATCTGATCTGAAGATAGAAGAAGACATAGTGGAAGAAGAACCGCGCTTTCCTGATGAGCCACTGATTGTGAGAGGCAGGATCAGAAGGCTAATGCAAGACATAGACTGTGGTGGGCTGTGCAAGTCGAGGTGCAGTGTTCATTCGAGGCCCAACCTGTGCAATAGGGCTTGCGGGACGTGCTGCGTGAGGTGCAAGTGTGTCCCACCTGGTACATCTGGTAACAGGGAGCTCTGTGGGACTTGCTATACTGACATGACCACACATGCCAACAAGACCAAGTGCCCTTAG 351 0.5214 MAPRVLLVLGMLLLTCLVKVSSDLKIEEDIVEEEPRFPDEPLIVRGRIRRLMQDIDCGGLCKSRCSVHSRPNLCNRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHANKTKCP* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0849 116 PANTHER GIBBERELLIN-REGULATED PROTEIN 2-RELATED 5 116 - -
Apr1g0849 116 Pfam Gibberellin regulated protein 56 116 IPR003854 -
Apr1g0849 116 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 5 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0849 Apr-Chr1 11222317 11223374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0849 - - gmx:100305516 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0849 1 11222317 11223374 Apr9g3071 9 37526360 37527482 ECH
Apr1g0849 1 11222317 11223374 Apr1g0849 1 11222317 11223374 ECH
Apr9g3071 9 37526360 37527482 Apr1g0849 1 11222317 11223374 PCT