Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0839 ATGGATTCCCGTTACCTTCCAATGCTTTTCTTTGTCAATCTGATGCTGGTGACAGCCCATGCTGCGTTGTCTCCTCAACTTTACTGGAAAATGATGCTTCCAAATACCCCAATGCCGAAATCAATCAAAGAGTTTGTAAAGCATGGAGAATATTTGGGTCACATGCAAAAGGAGACAATTGATGACCAAAATGCTCGTATAATGATGTGGGGCAAGAGTACCGGGAAGCAATTACAGGACAAAGCTCTCTTGCACGATGATACTAAAGAGAGTGAATCACAGAGTGATGCAGCAATTGCTCATCATCCAAAGAAGAGGCCTGAAATGAATCATCAAATAGATGATGTAAAAGTAGACTTAATCTTTTTTGAAGATGGCCTGAGTCCCGGCACAAAAATGGATGCACACTTCAATAAAACAGAATATAGAAAACCATTATTGCCTCGCCAAGTTGCTCAACGTATACCATTCTCTTCAGAAAAGATAAACGAAATACTACAGATATTATCCGTGAAACCCAACTCAGAAATGGCAAATGCTGCAGAGACACAAATTAGGATTTGTGAAGGGCCTCCACGAATTGGAGACGAAAAATTTTGTGCAACTTCACTTGAATCCATGTTGGATTATGTCATTTCTAGGCTGGGGAATAATCTCCGTGCTTTTGCTACTTATGCAGAAAAGGAAGGGAAGCCACAAAAATTCTTAGTGAAAAATGGAGTAAAGACATTAGCAGAGGGAAATGTGATTGCTTGTCATCTTATGGATTACCCATATGCTGTATTTTTTTGTCATCATTTAGAAAAGACCACCACACATTTTATGCCTTTGGAGGGAGAAGATGGGACTAGAGTCCAAGCTGTAGTTGTATGCCACAGAGACACATCATTTTGGGATCCAGATAATATGGAATTACAAGCCCTCAAAGTCAGGCCTGGAGATTGTCCAGTGTGTCATATATTCCCTGAGGTTCATGTTGTGTTTACCAAGTAG 993 0.4018 MDSRYLPMLFFVNLMLVTAHAALSPQLYWKMMLPNTPMPKSIKEFVKHGEYLGHMQKETIDDQNARIMMWGKSTGKQLQDKALLHDDTKESESQSDAAIAHHPKKRPEMNHQIDDVKVDLIFFEDGLSPGTKMDAHFNKTEYRKPLLPRQVAQRIPFSSEKINEILQILSVKPNSEMANAAETQIRICEGPPRIGDEKFCATSLESMLDYVISRLGNNLRAFATYAEKEGKPQKFLVKNGVKTLAEGNVIACHLMDYPYAVFFCHHLEKTTTHFMPLEGEDGTRVQAVVVCHRDTSFWDPDNMELQALKVRPGDCPVCHIFPEVHVVFTK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0839 330 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 15 329 IPR044816 -
Apr1g0839 330 SMART BURP_2 119 330 IPR004873 -
Apr1g0839 330 MobiDBLite consensus disorder prediction 84 110 - -
Apr1g0839 330 PANTHER BURP DOMAIN PROTEIN RD22 15 329 - -
Apr1g0839 330 Pfam BURP domain 121 329 IPR004873 -
Apr1g0839 330 ProSiteProfiles BURP domain profile. 121 330 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0839 Apr-Chr1 10996322 10997531 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0839 - - aprc:113851440 682.559