Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0825 ATGACTATTCACTTCATCTGCTTGTTCTTGTCACTCTCATCTTTCCATGTTTGTTTATCTCAAGCTCCACCAGCACAACATTCCAAACAGATCAACCCATTCAGCCCCAAAGCCTCTCTCATTCGCTATTGGAACACTCGAGTCTCCAACAAACGTCCCATCCCAAACTTCTTTCTTTCTAAAGCTTCCCCTCTCACACCAAACCACTACGCATTCCTCAACAGCCTCCTCAACCGTAGCCCCAAACCCTTCACACCACAGTTCCACCACTCTCTCTGCTCCGCACCAAATTTATATTGTTCCTTCGACGACACCGCAAACACACTTCAACACCCCACCGTTTCCAAAAACGACGACGCCAACTTCGCCGTTTACTCCAACAAGCGCTTCGCAAACTACGGTTCCTCCCGAGTCGGCGGAGTCGACTCGTTCAAGAACTACTCAAACGGCTTGAACTCAAACAACGACAGTTTCAGGAAATACAGCACGACCTCAACTCGCCACAGTGGCGAGTTCAACAACTACGCCGAAAACGGCAATGTTGCAAACACCAACTTCACAAGCTACGGTTCCGGCGCTTCCTCTACGTCCAACGACTTCAACAACTATGACAAAACGGTTAACGTCCCCAACCTCGGTTTCACCACCTACGATTCCGGCGCCGGAAACCACAAGCTCTCGTTCTCAAGCTACGGCAATGAAACAAACTCTGGCACCGAATCTTTTGCCAGCTACGGCAAGCGCATTCGCGGCGGAACCAGCGACTTCAAGAACTACGCTGGTGGCGCCAACATCCTGCAATCCGAGTTCGCCAATTATGGCGATTTAAGCACTGGAGTATCCAACGATTCCTTCAAGTTCTACAGCTTCGACGGCAACAATCCTCGGAACGTTTTCAAAAGCTACGGCGCCGGATCGGTCTCCGGCTCCGACACGTTCAACAGCTACCGTAACCGTGCCAATGTCGGCGACGACTCATTCCAAAGCTACGCCGTGAAATCGAAATCCGGCACAGCCAATTTCGCCAACTACGGCCAATCGTTCAACGTGGGAAACGACAGTTTCGCCGAATACGGAAGAGGATCGTTGGGCCGGGCCTCGTTTGGGTTCAGGTCGTACGGGTTGGGCCGCGCGTTCAAGGGATATAACAAACAAGGCGCGTCGTTTGCTGAATATCACAATCTTAGCGCTTCGAGTGGCAAAGTTGTGAATAAGTGGGTGCAGCCAGGTAAATTTTTCAGGGAGGAAATGATGAAGGAGGGGAACGTGATGGTGCTGGCGGACATTAGGGATAAGATGGTTGAAAGGTCGTTTTTGCCCCTCGGCATTTCGTCGAAATTACCGTTTTCTTCTTCGAGGCTGGAGGAAATGAGGCAGGTGTTCCACGCGCGGGAGGGGTCGGCTACGGAGCGCGTGATGGTAAACGCATTAGAGGAGTGCGAGAGGGCTCCGAGCCGGGGTGAGACGAAACGGTGCGTTGCATCCGCAGAGGGAATGATAGAGTTTGCGGTATCGGTGTTGGGATCCGACGTGGCGGTGAGGACTACGGAGAATGTGAATGGTTCAGGAAAGAGCGTGATGATTGGAAGGGTCTACGCAGTGGACGGTGGAAAAGTGACCAAGTCAGTCTCGTGTCATCAGAGTTTGTACCCTTATTTACTGTATTATTGTCACTCTGTCCCCAAAGTGAGAGTGTACGAAGCTGATATTCTTGACGTGGACACTAAGGTGAAGATTAATCATGGGGTTGCCATTTGTCACGTTGACACCTCATCGTGGGGTCCAGAACATGGTGCCTTCTTGGCTTTGGGGTCTGCCCCCGGAAAAATTGAGGTGTGCCACTGGATCTTCCAGAATGACATGACTTGGACCATTGCCCATTGA 1884 0.5138 MTIHFICLFLSLSSFHVCLSQAPPAQHSKQINPFSPKASLIRYWNTRVSNKRPIPNFFLSKASPLTPNHYAFLNSLLNRSPKPFTPQFHHSLCSAPNLYCSFDDTANTLQHPTVSKNDDANFAVYSNKRFANYGSSRVGGVDSFKNYSNGLNSNNDSFRKYSTTSTRHSGEFNNYAENGNVANTNFTSYGSGASSTSNDFNNYDKTVNVPNLGFTTYDSGAGNHKLSFSSYGNETNSGTESFASYGKRIRGGTSDFKNYAGGANILQSEFANYGDLSTGVSNDSFKFYSFDGNNPRNVFKSYGAGSVSGSDTFNSYRNRANVGDDSFQSYAVKSKSGTANFANYGQSFNVGNDSFAEYGRGSLGRASFGFRSYGLGRAFKGYNKQGASFAEYHNLSASSGKVVNKWVQPGKFFREEMMKEGNVMVLADIRDKMVERSFLPLGISSKLPFSSSRLEEMRQVFHAREGSATERVMVNALEECERAPSRGETKRCVASAEGMIEFAVSVLGSDVAVRTTENVNGSGKSVMIGRVYAVDGGKVTKSVSCHQSLYPYLLYYCHSVPKVRVYEADILDVDTKVKINHGVAICHVDTSSWGPEHGAFLALGSAPGKIEVCHWIFQNDMTWTIAH* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0825 627 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 1 626 - -
Apr1g0825 627 ProSiteProfiles BURP domain profile. 412 626 IPR004873 -
Apr1g0825 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1 626 - -
Apr1g0825 627 Pfam BURP domain 412 624 IPR004873 -
Apr1g0825 627 SMART BURP_2 410 626 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0825 Apr-Chr1 10559479 10561461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0825 - - gmx:100787394 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0825 1 10559479 10561461 Apr1g0825 1 10559479 10561461 ECH