Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0822 ATGAATGCAAACGGAAAACGCAGAATCACAACTCACCAGGACGCTGCCACCATGAAAAAATCGCTGTCGAAGAACTCCGACTCCTCGACTCAGTTCGACTCGCCTCTCCCCTTCCACTCTCCAGCGCGATGGGACGGAACTGACCCGCTGGAGTCACCGGAATACCAGTCGACGGAAAACTCGCCGGGAAAACTGGTGGAAAACCCTATGGCTATCGTGAAGCTCGATATGCGAAAGCAGGTCTCTCCCAATAAACGCGCAGAGCGCCAGAAGCCGCCGGAAAAAGCGCCTTCGGCGGTGATGATGTACACCGGATCAGCAGCGGAGGAGCCTCAGCGGCCGGCGGTGCAGTTGGGAGCGGCAAGCGGAGGAGGTGAACGGAGATCTAGGTCGGCGGCACTGGGGTGGAAGACGGAGGAGGTGGTGAGTAAGGCGGCGTTAGGGTTCCGGCTGAGCGAGGTGGCGGTGTGTCTGATTTCGTTTTCAGTTATGGCTGCAGATAAAACGCAAGGTTGGAGTGGCGACTCCTTTGATCGCTATAGAGAATATAGGTATTGTTTATCTGTGAATGTTATCGGATTTGCTTATTCGGCGTTACAAGCATGTGATCTGGCTTGTCAATTAGTCACTGGGAAACACTTAATCAGTCACCACCTTCGCTATCACTTTGATTTCTTCTTCGATCAGGTTCTGGCATATCTTCTGATATCAGCATCATCATGTGCAGCCACGCGGGTTGACGATTGGCAATCGAATTGGGGGAAAGATGAGTTCACAGAAATGGCAACTGCTTCAATTGGAATGTCCTTCATCGCTTTTATTGCCTTTGCAATGAGCTCGCTCATCTCTGGTTACATCCTATGTAACCGGAGCTCTATGTGA 882 0.5181 MNANGKRRITTHQDAATMKKSLSKNSDSSTQFDSPLPFHSPARWDGTDPLESPEYQSTENSPGKLVENPMAIVKLDMRKQVSPNKRAERQKPPEKAPSAVMMYTGSAAEEPQRPAVQLGAASGGGERRSRSAALGWKTEEVVSKAALGFRLSEVAVCLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIGFAYSALQACDLACQLVTGKHLISHHLRYHFDFFFDQVLAYLLISASSCAATRVDDWQSNWGKDEFTEMATASIGMSFIAFIAFAMSSLISGYILCNRSSM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0822 293 PANTHER CASP-LIKE PROTEIN 78 293 - -
Apr1g0822 293 MobiDBLite consensus disorder prediction 1 131 - -
Apr1g0822 293 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 78 293 - -
Apr1g0822 293 Pfam Casparian strip membrane protein domain 142 275 IPR006702 -
Apr1g0822 293 MobiDBLite consensus disorder prediction 1 36 - -
Apr1g0822 293 MobiDBLite consensus disorder prediction 79 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0822 Apr-Chr1 10507536 10509628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0822 - - gmx:100789870 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0822 1 10507536 10509628 Apr9g3095 9 37767366 37769192 ECH
Apr1g0822 1 10507536 10509628 Apr1g0822 1 10507536 10509628 ECH
Apr9g3095 9 37767366 37769192 Apr1g0822 1 10507536 10509628 PCT