Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0818 ATGGCAAAGCAGTCATCTGAGCTGGCCATTGAAGAACTGAAGAAGCTTCTCAGAGAGAAGGAGGAACTTGATGGGGTTGCAGCGCCAAAAATTGAGGAGCTTATAGCTGAGTTAAAAGGATGTAATGTGTGTCCATTTGAGCCTCCAGTACAGAGAATCATAGACGGATTCACTTACTTCAAGCGCAACAATTTCGACAAGAACCCCGATCTGTACGCAGAACTTGCTAAGGGACAAAGCCCTGAGTATCTGATATTTGCTTGCTCTGACTCTCGAGTGAGTCCCACTACAATCCTGAACTTCCAACCTGGGGATGCTTTCATGGTCCGCAACATTGCAAACATGGTTCCTCCATTTAATCAGCTAAGGTACAGTGGAGTTGGTGCCGCCATTGAGTATGCTATCACGGCTCTTAAGGTGCCAAATATTCTGGTAATTGGACACAGTCGCTGCGGCGGAATAAAAAGGCTTATGAGTTACCCAGAAGATGGTTCTGCTCCCTATGACTTCATAGATGATTGGGTGAAAATTGGTTTGCCTGCCAAACTCAAGGTCCTGAAAGAATATGATGGCTATGATTTCGATGAACAGTGCAAATTCTGTGAAAAGGAGTCGGTGAATAACTCGTTAGTGAATTTGAGGACATATCCATATGTTGAAAGTGGAATAAGGAACAACAGCATAGCACTGTTCGGGGGTTACTATGATTTTGTGAAGGGAGAATTCCAGCTTTGGAAGTTCGAGTCTCACATCACTAAACCCATTACCATCCCTCTCTGTGACCATGAGTAA 792 0.4432 MAKQSSELAIEELKKLLREKEELDGVAAPKIEELIAELKGCNVCPFEPPVQRIIDGFTYFKRNNFDKNPDLYAELAKGQSPEYLIFACSDSRVSPTTILNFQPGDAFMVRNIANMVPPFNQLRYSGVGAAIEYAITALKVPNILVIGHSRCGGIKRLMSYPEDGSAPYDFIDDWVKIGLPAKLKVLKEYDGYDFDEQCKFCEKESVNNSLVNLRTYPYVESGIRNNSIALFGGYYDFVKGEFQLWKFESHITKPITIPLCDHE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0818 263 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 132 152 IPR015892 GO:0004089|GO:0008270|GO:0015976
Apr1g0818 263 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 88 95 IPR015892 GO:0004089|GO:0008270|GO:0015976
Apr1g0818 263 Pfam Carbonic anhydrase 83 241 IPR001765 GO:0004089|GO:0008270
Apr1g0818 263 SMART Pro_CA_2 76 246 IPR001765 GO:0004089|GO:0008270
Apr1g0818 263 Gene3D Carbonic anhydrase 42 257 IPR036874 GO:0004089|GO:0008270
Apr1g0818 263 SUPERFAMILY beta-carbonic anhydrase, cab 36 255 IPR036874 GO:0004089|GO:0008270
Apr1g0818 263 CDD beta_CA_cladeB 56 245 IPR045066 GO:0004089|GO:0008270
Apr1g0818 263 PANTHER CARBONIC ANHYDRASE 1 257 - -
Apr1g0818 263 PANTHER CARBONIC ANHYDRASE 1 257 IPR001765 GO:0004089|GO:0008270
Apr1g0818 263 Coils Coil 3 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0818 Apr-Chr1 10387679 10390655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0818 K01673 - gmx:547671 443.351