Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0786 ATGGATTCAGATCATGAATGTCGTGAAAAAAGTGATTCTTTCTTTGTTTGGGACGATAAATCACAGCTTTATTTCCACGCCAGTACTGGATTTTACCATGACCCTAATGCTGGCTGGTACTATAGCAGCAGAGATGGTGTTTATTACAAATTTGAAGATGGGAATTATGTACCTTTCGATTCCAATAAGGATGACAGTGGAGAAACATATCCATGCAAAGAAACCACAACTGAAAGTCCTCGACAAATATATGGGAACAACAGTGAGGATTACCCTTCTGTCCTTGAAAGTAAATTTGAAGCCAACCCAGAGACAGGAACCCTGGCTGATGAAGCAGCTGCTGATGCCACAAATTCCATGAGCAGTCCAGCTTATGAAAACCCTCCACCACCATCAGAATGGTTAGAAGACACGCTCATTGATCTATACTTATCTGGCTACAAGGACATAGCAGTTAGTGCAGCTGATGCAGTGACAGTTCCATTGGAAACAGATGATGGATACAACTCCTTAGCAGCTGATGCTTACAACAATAGATATGCAGCAGGTGAGTGGATCCCAGATTCAGTGAATGAAAATGGCTTAGCTGATAATAAAAGTACTGTAGATGAAGGTATAGCTTACAGCAACACTTATGAACTGGAAGAAGGTGAGTGGATCCCTGACACAGAGGATGAAAATGGCATAGCCAATCGAAGTACCTTAGATGAAGGTATATCGTTAGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTATTGAATCAGGGAATGATCTGGTTTCAGAGATTCCAATTTTGGACTTGTGGGATTGGGAAATGGTTAGAGGATCCAAAACGGATGGAAAAGATAAGGTGGCAAGGTTGGTTGGGAGACTGGTGAAGCCATCTGCAAAGCAACATCCATCTATCCCTTCTGCTGGAGGGAAATTAAGATCTGCTCCTATCTGTGAAGCACATCTCGATCTGGTACGAGTTAAAACAGGACAAGTGTACAAATTGCGAAATCCTAGTGCAAGATATGTGGCTTCGATATCAACTTATGATTCTACGAATCCAACAAAAGATTGGGATTTGCCTGAGTTATCACCTAATAGAAAAACAGCTCTTCTCTGCAAGTCTAGTGAAGGCACTGCTTCAGCTTCAGATAACATCGCTATGGAGAAGGATTTGTCTGGGGTGCCAAGTCAGCTATCTGCATCTAAGCAAATAAAATATCAATACAGAGATAGAGCTGCTGAAAGAAGAATACTGCATGGTGGCTTTGGCGTGGGTCCAGGACAGAAGAATCTAGCTATCAGTTATAATTCGCCATCTTCACCTGATACTGATTGTCCGCAAGAAGCTGCATCAGAGGCCTTGGAGATGTCATTTGGAGCGGGTAGCTATGCCAGAAAACTTCTAGAAAGCATGGGTTGGAAGGAGGGAGAAGGGCTTGGCAGTTCTACCAAGGGTATGGTGGAACCTATCCAACCGGTTGGAAACATTGGCAATGCGGGCTTGGGATGGCCTCGTTGA 1518 0.4321 MDSDHECREKSDSFFVWDDKSQLYFHASTGFYHDPNAGWYYSSRDGVYYKFEDGNYVPFDSNKDDSGETYPCKETTTESPRQIYGNNSEDYPSVLESKFEANPETGTLADEAAADATNSMSSPAYENPPPPSEWLEDTLIDLYLSGYKDIAVSAADAVTVPLETDDGYNSLAADAYNNRYAAGEWIPDSVNENGLADNKSTVDEGIAYSNTYELEEGEWIPDTEDENGIANRSTLDEGISLDEEKWRAQYGQVIESGNDLVSEIPILDLWDWEMVRGSKTDGKDKVARLVGRLVKPSAKQHPSIPSAGGKLRSAPICEAHLDLVRVKTGQVYKLRNPSARYVASISTYDSTNPTKDWDLPELSPNRKTALLCKSSEGTASASDNIAMEKDLSGVPSQLSASKQIKYQYRDRAAERRILHGGFGVGPGQKNLAISYNSPSSPDTDCPQEAASEALEMSFGAGSYARKLLESMGWKEGEGLGSSTKGMVEPIQPVGNIGNAGLGWPR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0786 505 Pfam G-patch domain 462 502 IPR000467 GO:0003676
Apr1g0786 505 MobiDBLite consensus disorder prediction 72 87 - -
Apr1g0786 505 ProSiteProfiles G-patch domain profile. 460 505 IPR000467 GO:0003676
Apr1g0786 505 MobiDBLite consensus disorder prediction 60 87 - -
Apr1g0786 505 PANTHER RNA-BINDING PROTEIN 8 503 - -
Apr1g0786 505 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 8 503 - -
Apr1g0786 505 Pfam OCRE domain 13 58 IPR041591 -
Apr1g0786 505 SMART G-patch_5 458 504 IPR000467 GO:0003676
Apr1g0786 505 CDD OCRE 13 58 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0786 - - gmx:100806477 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0786 1 9632290 9636435 Apr1g0786 1 9632290 9636435 ECH