Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0769 ATGTTGCTGAGAGTTTTCGTGTGTGTATTGCAAGCCAAGGACCTGCCCGTGAAGGACTCATGTGTGAAGCTTAAACTTGGCAAGTTTAAGTGCAAAACTAGGACATTGAGGAACACGTCTAACCCTGTTTGGAACAAAGAGTTTGGTTTCAAGGTGCATGATGCGAAGGACGTGCTTCTTGTGTCTGTTGCTAATCATAGTGATGAGTGGAGGGTGAGCAATGGTTGTGTGAATTTTGTAGGTGAGGTACGGATTCCGGTAGGTTCAGTAGCTTTTGAGGATAAGCAAACCTTGCTGCCCACGTGGTTTTCTCTTGAAAGTCCCAGGAGTGGCAAATTTTTCAATAAATTTTGTGGGAAAATTCTCCTTACCATTTCCCTTCATGGTAAAGGCCGTGCTTCTTTTATCAATCATAAGTATTCTCCAAATTCAATTAGTGCAATTGAGGACTCAAGAGATTTGGAAGCTTTGCATATTTCATCTCAGGCACATTGTCGTAAAATGGGTGAAGGCAAACACTTGTTAAAGGTTATTGCTAATCGTCTGGATAGGATTTTCAATAAGAAAGGAAGCTCGAAACCTGTGGATTTTTCAGAGCCATCCAATTCATTATCTGATGATGAAGATAGTGTGCAGAAAAATTCACCTCCTAGTAGCTTTGAAGAAGCCATTGCACTAATGGAGTCAAGAGATAAGAAACCAGAAATGCCTGAAAATTTGCAGGGTGGTATTCTAGTAGATCAGTTTTATGTAGTGTCTCCAAATGACCTTAATGTGTTTCTTTTTGCACCCAATTCACAGTTTAGGAAAGATTTGGAAGAACTACAAGGAACAACAAATGTGCAAGAGGGGCCTTGGACATGGAAACACGGAGACATGTCATGTTTAACAAGAGTTGTTTCTTATACAAAAGCTGCTACAAAATTAGTTAAGGCAGTTAATGCCTTTGAGGAGCAAACCTACATTAGAGTGTGCAAAAAGGAATTTGCTATACTTGTTAGTGTAAGAACACCAGAGGTCCCATACGGAAATACATTTAGGACTGAATTACTTTACAAGATAATGCCTGGAGGAGAGGCATCTTGTGGAGAGGAATGTTCCCACCTTGTTGTATCATGGGGCATTGTCTTTCTCCAAAGCACAATGATGAAAGGCATGATAGAAGGTGGTGCAAGACAAGGATTGAAGGAGAGTTTTAACAAGTTCTCCACCAAGCTTGCTCAGAATTTTAAGGTGCTAGATATGCCAGATTTGTCAGAAAAGGAACATTTGTTGGCTACTTTGCAAACAGAAGACCAGTGGAATTGGTGGCAGGCAATTAAGTACTTTTGGAATTTGACAGTGGTTTCTACCATTTTTATGTTTTTGTATGTGTTGGTGCATATTTTAAGGTGTGGTCCAAGTCAACCTCAGGGCTTGGAATTTAGGGGGATTGAATTGCCAGATAGTTTTGGAGAGCTGATTACAAGTGGAGTTTTGATCATCCAGTTGCAGCGTGTTTATAATATGGTGTCTCACTTTGTGCAAGCTAGATTTCAAATGGGAACTGACCATGGCCTCAAAGCTCATGGTGATGGATGGGTTCTTACCGTGGCTTTAATTGAGGGGGTTGACTTGGCCTCCTTGGAGTCAGAAGGGTTGTCAGATCCCTATGTGGTTTTCACCTGTAATGGACAAATAAGGTCAAGTTCTGTCAAGCTTCAAACATCTGACCCTCAATGGAACGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTAGATGTGGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTCGGACATGCTGAGATCAATTTCCTAAAGCACACATCAACAGAACTGGCAGACATGTGGATCATGCTTGAAGGAAAGCTGGCTCAGTCTTCTCAGTCAAAGTTGCATTTGAGAATTTTCTTGGACAATAATAAAGGAGTTGAAACAATTAAGGAATATTTGGAGAAGATGGAAAAGGAAGTTGGTAAAAAGTTGAATCTTAGATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGGGTTGCCTCCGGAAGAATTTCTAATCAAAGATTTCACTTGTTATCTGAAGAGAAAAATGCCTTTACAGGGTCGTCTGTTTCTTTCAGCAAGGATTCTGGGGTTTTATGCCAATCTGTTTGGACATAAAACCAAGTTTTTCTTCCTTTGGGAAGATATTGAAGAAATACAAGTGCTTCCTCCATCATTGGCATCAGTAGGAAGCCCTACATTGGTCATAATTCTGCGACAAGGACGAGGTCTTGATGCAAGGCATGGTGCAAAGACTCAAGATGAACAAGGAAGACTTAGGTTTCATTTTCAATCATTTGTTTCGTTTAGTGCTGCCTCCAGAACAATAAAGGCCTTGTGGAGAACAAGAATACTGAATCCCTATCAGAAAGAACAAATTACAGAAGAGCATGAAGATCAAGAAGGCTTGGTAATTCCAGAAGACTCTGGATCTATCCTAGAGGATGAAGCAAAAATGTCCAAAATTTTCTCAGCAGAACTTCCAATTAAGATGAGATCTGTGATGGGAATTTTTTATGGAGGGAACCTGGAGCATAAAATTATGCAGAGAACTGGATGTTTGAATTATGAAACCACAGCATGGGAACTAGTAAAGCCTGATGTCTTTGAAAGGCGTGTTTCATATCAATTCAATCGGCACGTGTCAGCTTTTGGTGGTGAAGTTACATGTACACAACAAAAGTTTCCAAATGCAAACACTGGAGGTTGGACTGTGATTGAAGTTATGGCTCTTCACGGTGTCCCATTTGCTGATCACTTCCATATTCATTTCAGGTTCGAAATTGAGAAATCCTCTCTTGGTGACTGTGCTTGCAAGTGTGATGCTTACATTGGTATTATGTGGCTTAAGAGCTCTAAGTTTCAGCAAAGGATCAACCGGAACATAACAGCCAAGTTTAGCTTTCGACTGAAGGAAATATTTGAATTGGTTCAGAAAGAGATTTTGTTAATGTCTCAGAACTCACATGGATGA 3042 0.4014 MLLRVFVCVLQAKDLPVKDSCVKLKLGKFKCKTRTLRNTSNPVWNKEFGFKVHDAKDVLLVSVANHSDEWRVSNGCVNFVGEVRIPVGSVAFEDKQTLLPTWFSLESPRSGKFFNKFCGKILLTISLHGKGRASFINHKYSPNSISAIEDSRDLEALHISSQAHCRKMGEGKHLLKVIANRLDRIFNKKGSSKPVDFSEPSNSLSDDEDSVQKNSPPSSFEEAIALMESRDKKPEMPENLQGGILVDQFYVVSPNDLNVFLFAPNSQFRKDLEELQGTTNVQEGPWTWKHGDMSCLTRVVSYTKAATKLVKAVNAFEEQTYIRVCKKEFAILVSVRTPEVPYGNTFRTELLYKIMPGGEASCGEECSHLVVSWGIVFLQSTMMKGMIEGGARQGLKESFNKFSTKLAQNFKVLDMPDLSEKEHLLATLQTEDQWNWWQAIKYFWNLTVVSTIFMFLYVLVHILRCGPSQPQGLEFRGIELPDSFGELITSGVLIIQLQRVYNMVSHFVQARFQMGTDHGLKAHGDGWVLTVALIEGVDLASLESEGLSDPYVVFTCNGQIRSSSVKLQTSDPQWNEILEFDAMEEPPSVLDVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWIMLEGKLAQSSQSKLHLRIFLDNNKGVETIKEYLEKMEKEVGKKLNLRSPQRNSTFQKLFGLPPEEFLIKDFTCYLKRKMPLQGRLFLSARILGFYANLFGHKTKFFFLWEDIEEIQVLPPSLASVGSPTLVIILRQGRGLDARHGAKTQDEQGRLRFHFQSFVSFSAASRTIKALWRTRILNPYQKEQITEEHEDQEGLVIPEDSGSILEDEAKMSKIFSAELPIKMRSVMGIFYGGNLEHKIMQRTGCLNYETTAWELVKPDVFERRVSYQFNRHVSAFGGEVTCTQQKFPNANTGGWTVIEVMALHGVPFADHFHIHFRFEIEKSSLGDCACKCDAYIGIMWLKSSKFQQRINRNITAKFSFRLKEIFELVQKEILLMSQNSHG* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0769 1013 PANTHER BNAA05G37250D PROTEIN 3 1010 IPR044511 -
Apr1g0769 1013 MobiDBLite consensus disorder prediction 194 218 - -
Apr1g0769 1013 MobiDBLite consensus disorder prediction 191 218 - -
Apr1g0769 1013 CDD C2 529 629 - -
Apr1g0769 1013 ProSiteProfiles C2 domain profile. 508 627 IPR000008 -
Apr1g0769 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 527 651 IPR035892 -
Apr1g0769 1013 ProSiteProfiles VASt domain profile. 841 1004 IPR031968 -
Apr1g0769 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 132 IPR035892 -
Apr1g0769 1013 Pfam GRAM domain 681 780 IPR004182 -
Apr1g0769 1013 Gene3D - 678 805 IPR011993 -
Apr1g0769 1013 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Apr1g0769 1013 SMART gram2001c 680 746 IPR004182 -
Apr1g0769 1013 SMART C2_3c 528 627 IPR000008 -
Apr1g0769 1013 SMART C2_3c 4 99 IPR000008 -
Apr1g0769 1013 Pfam VAD1 Analog of StAR-related lipid transfer domain 245 394 IPR031968 -
Apr1g0769 1013 Pfam VAD1 Analog of StAR-related lipid transfer domain 845 985 IPR031968 -
Apr1g0769 1013 Gene3D C2 domain 511 647 IPR035892 -
Apr1g0769 1013 ProSiteProfiles VASt domain profile. 241 414 IPR031968 -
Apr1g0769 1013 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 3 1010 - -
Apr1g0769 1013 Gene3D C2 domain 4 144 IPR035892 -
Apr1g0769 1013 Pfam C2 domain 528 627 IPR000008 -
Apr1g0769 1013 Pfam C2 domain 5 105 IPR000008 -
Apr1g0769 1013 CDD C2 5 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0769 Apr-Chr1 9251290 9255935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0769 5 135 Lipid Metabolism Gene Families AT1G22610 30.216 2.94e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0769 - - gmx:100811103 1773.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0769 1 9251290 9255935 Apr1g0769 1 9251290 9255935 ECH