Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0759 ATGGCATATTTAGAGAAAATAAGAGAGGCACAGAGGGGTGGAGGCCCAGCCACCATACTAGCCATTGGCACTGCAACTCCATCCAATTGCATTTACCAGTCTGATTTCACCGATTATTACTTCCGAGTCACCAAGAGTGACCACATGACTCAACTCAAGGCCAAGCTCAAGCGCATATGTGAGAAGTCAATGATAAAGAAACGATACGTGCACTTAACCGAAGAAATCCTGAAAGAAAACCCCAACATAAGCACTTACAGTGAATCATCCTTGGATGCGCGACAAGACATCTTGGTTGAGGAGGTACCAAAGCTGGGAGAGAAGGCAGCATCAAAAGCCATAAAAGAATGGGGAAGACCCAAGTCAGAGATAACTCATTTAATATTTTGTTCAACATCGGGTGTAGACATGCCTGGTGCTGATTATCAACTCATCAAACTCTTAGGCCTCAAACCTTCCACCAAAAGGATCATGCTATACCATCAAGGTTGCTTTGCTGGTGGCACCGTGCTTCGTCTTGCCAAAGACCTTGCTGAGAACAATGCTCATGCACGTGTCCTCGTGGTGTGTTCCGAGATCACTGTTGTCACCTTTCGTGGACCCTCCGAAACGCACTTGGATTCCTTAGTGGGCCAAGCTCTCTTTGGTGATGGTGCTTCATCCGTCATCGTTGGATCTAACCCTGACCCCTCCATCGAACGACCCTTATTTCACCTTGTCTCGGCTTCAGAGACCATTCTACCCCACTCTGAGGGTGCCATTGAGGGACACTTGCGCGAGGTGGGACTCACGTTTCATCTCAAGGACAATGTTCCTCAGTTGATTGGAGAGAACATTGAGAAAAGCCTTGAAGAAACCTTTCACCCGCTTGGAATCAACGATTGGAACTCGTTGTTTTGGATAACCCACCCTGGTGGCCCTGCAATCTTGAAGCAAATTGAAGCGAGTCTTGGGTTGAAGGCAGAGAAACTAAGAGCAACTAAACAGGTTCTGAGTGAGTATGGGAACATGTCGAGTGCATGTGTCCTGTTTATATTGGATGAGATGAGAAGGTGGTCCATGGAAGAAGGGAAAGACACAACTGGTGAGGGACTAAAGTGGGGCGTTTTATATGGGTTTGGCCCTGGCTTGACCATGGAGACCATCGCTTTGCATAGCGCTACCATAGACCACGGCCACTAG 1182 0.4772 MAYLEKIREAQRGGGPATILAIGTATPSNCIYQSDFTDYYFRVTKSDHMTQLKAKLKRICEKSMIKKRYVHLTEEILKENPNISTYSESSLDARQDILVEEVPKLGEKAASKAIKEWGRPKSEITHLIFCSTSGVDMPGADYQLIKLLGLKPSTKRIMLYHQGCFAGGTVLRLAKDLAENNAHARVLVVCSEITVVTFRGPSETHLDSLVGQALFGDGASSVIVGSNPDPSIERPLFHLVSASETILPHSEGAIEGHLREVGLTFHLKDNVPQLIGENIEKSLEETFHPLGINDWNSLFWITHPGGPAILKQIEASLGLKAEKLRATKQVLSEYGNMSSACVLFILDEMRRWSMEEGKDTTGEGLKWGVLYGFGPGLTMETIALHSATIDHGH* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0759 393 Gene3D - 1 235 IPR016039 GO:0016746
Apr1g0759 393 PIRSF PKS_III 3 388 IPR011141 GO:0009058|GO:0016747
Apr1g0759 393 SUPERFAMILY Thiolase-like 235 385 IPR016039 GO:0016746
Apr1g0759 393 PANTHER CHALCONE SYNTHASE 8 4 389 - -
Apr1g0759 393 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Apr1g0759 393 SUPERFAMILY Thiolase-like 1 233 IPR016039 GO:0016746
Apr1g0759 393 CDD CHS_like 16 384 - -
Apr1g0759 393 Gene3D - 236 390 IPR016039 GO:0016746
Apr1g0759 393 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Apr1g0759 393 Pfam Chalcone and stilbene synthases, C-terminal domain 239 387 IPR012328 -
Apr1g0759 393 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 389 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0759 Apr-Chr1 9119031 9121925 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0759 K00660 - vvi:100263443 623.239