LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr1g0753	ATGGCGCTAGGGAAGAATATCCGAGGCGATGGGAGGAAGTTATCAAACTACTGTTCAACTGTCTCTGTAGCGGTGTTTGTTGCATTTTGTTTAGTAGCTGTATGGATTGTAATGTCATCTATTGTTCCAATTCAGAATTCAGTCATTAAGGTATCTGAGGCCATTCATGATGCTAAAAATGTAGCAAGTGAAAATAGTTCCAGGCAATTTGAAGACAGATTAGGTGATATACCCGACGAATCAACACAAGGAGATAGCCAGACTCATAAATCTGAGAGTGATAGTCATCCAGAAAACCAGGATGACCACCATGGAGGAGTTGAAAAAGTGTCTGATAATACAGCTGAAGAAAACATGCAAGAGGTTGTTAGGGAAAACTCAAGTGAAGAGAATGATTTAGAGAAGGGTCCTGGGAATACAGCTGAGGAGGACTATCAAATGAGGCATATCAAGCCAAGCACTGATGAGAAGGAGAAAGAATCAGATGAAAGCTTAAATTCAGAATCTGAAGAAGCAAAAACATTGAATGGTCAAATTAATGATGATGAACTTGGAGAATCAATGGAAACTATAGATGAAAAAAAATCTGAAAAGAGTGTAAATGATAACAAATTAGAGACAGAAAAGCATACAGATGAAGTCACAGAACAAGATGAGATGGTTGGTGAGACTGAGGAGGAGAAAATCAAGAAAAATCTGCATTCAAAGACAACACAAAGTACTGGAGAGAGTAATGCAGAAAGGCATGAAGACAGTGCAGCTTCAAAAGAAGCTTTTATTAATGGTACCCTTTCTGAAACTTTGACTGAAGCTGGCACTGAAAATGGAACATGGTCAACTCAAGCTTCAGAGTCGCAGCATGAGAAGGAATCACAGAAGTCCTTGATTTCTATTGACAGCAAAAACTATGACTGGAAACTTTGTAATACAACTACTGGATCAGAGTACATTCCTTGCCTTGACAATTGGCAAACAATTAAAAGGCTTAAAAGCATAAGGCACTATGAACATCGTGAGAGGCACTGTCCTGATAAAGCTACCACTTGTCTTGTTTCTCTGCCTGAAGGCTATAGAAGCCCAATTAAGTGGCCCAAAAGCAGGGAAATGATATGGTACAACAATGCTCCGCACACAAAGCTTGTAGAATATAAGGGTCATCAAAACTGGGTCAAAGTTACCGGTGAATACCTTACTTTTCCTGGTGGGGGAACTCAGTTTAAACATGGAGCTCTTCATTACATTGAATTCATTCAGAAATCTCTTCCTAAAATTGCATGGGGGAAGAGAAGTCGTGTGGTATTAGATGTTGGATGTGGAGTAGCCAGCTTTGGAGGCTATCTGTTTGAAAAAGATGTTCTAACCATGTCATTTGCTCCTAAAGATGTGCATGAGGCACAGGTGCAATTTGCACTGGAACGTGGAATTCCTGCCACATTGGGTGTCATGGGCACTAAAAGATTGCCCTACCCTGGTTCTGTCTTTGATCTTATCCACTGTGCTCGTTGTAGGGTCCCTTGGCACATAGAAGGTGGTAGGCTACTCTTAGAGCTTAATCGTGTCTTGCGACCTGGAGGTTATTTTGTATGGTCTGCTACTCCAGTGTACCAAAAGGATCCAGAAGATGTTGAGATTTGGAAAGCCATGGGTGAAGTTACAAAGTCAATGTGCTGGGATTTGGTGGTAATTGCAAAGGACAAATTGAATGGAGTGGCAGCAGCGATGTATAGAAAACCAACTGACAATGAATGCTATAACCAAAGATTAAACAATGAGCCGCCAATGTGTGATGGATCTGATGATCCTAATACAGCCTGGAATATATCACTACAGGCTTGTATGCACAAAGTGCCTACAGATGCATCAGACCGAGGTTCAATCTGGCCTGAGCAATGGCCACTGAGGTTGGAAAAACCACCTTACTGGTTAAACTCTCAGGCTGGTGTTTATGGAAGATCTGCTTCAGTAGAATTCAATGCCGATTACAAGCATTGGAAGAATGTTCTTTACCACTCATATTTGAATGGAATGGGTATCAATTGGTCCTCAGTAAGAAATGTCATGGACATGAGAGCTGTTTATGGAGGGTTTGCTGCAGCACTCAAAGCCATGAAATTAAATGTTTGGGTAATGAATGTGGTTCCAATTGATTCTCCAGACACGCTGCCAATAATATATGAGCGTGGATTATTCGGTATTTATCACGATTGGTGCGAATCCTTCAATACCTATCCTAGATCTTATGATCTTCTCCATGCTGATTCCTTAATCTCAACACTTAAAGAAAGGTGCAACATAGTGGCAGTGATTGCAGAAGTTGATAGGATCCTGAGACCAGAAGGATATTTGATCATAAGAGACAATGTTGAAACTATTAGTGAGATAGAGAACATGGCAAAATCTCTACACTGGGAAATTCGGTTAACATATTCAAAAGATGGGGAGGGATTGCTTTGCGTTCAGAAGACATTCTGGCGTCCAACAAAGGTTGAAACCATTGTGTCAGCCATTGCCTGA	2514	0.4085	MALGKNIRGDGRKLSNYCSTVSVAVFVAFCLVAVWIVMSSIVPIQNSVIKVSEAIHDAKNVASENSSRQFEDRLGDIPDESTQGDSQTHKSESDSHPENQDDHHGGVEKVSDNTAEENMQEVVRENSSEENDLEKGPGNTAEEDYQMRHIKPSTDEKEKESDESLNSESEEAKTLNGQINDDELGESMETIDEKKSEKSVNDNKLETEKHTDEVTEQDEMVGETEEEKIKKNLHSKTTQSTGESNAERHEDSAASKEAFINGTLSETLTEAGTENGTWSTQASESQHEKESQKSLISIDSKNYDWKLCNTTTGSEYIPCLDNWQTIKRLKSIRHYEHRERHCPDKATTCLVSLPEGYRSPIKWPKSREMIWYNNAPHTKLVEYKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIEFIQKSLPKIAWGKRSRVVLDVGCGVASFGGYLFEKDVLTMSFAPKDVHEAQVQFALERGIPATLGVMGTKRLPYPGSVFDLIHCARCRVPWHIEGGRLLLELNRVLRPGGYFVWSATPVYQKDPEDVEIWKAMGEVTKSMCWDLVVIAKDKLNGVAAAMYRKPTDNECYNQRLNNEPPMCDGSDDPNTAWNISLQACMHKVPTDASDRGSIWPEQWPLRLEKPPYWLNSQAGVYGRSASVEFNADYKHWKNVLYHSYLNGMGINWSSVRNVMDMRAVYGGFAAALKAMKLNVWVMNVVPIDSPDTLPIIYERGLFGIYHDWCESFNTYPRSYDLLHADSLISTLKERCNIVAVIAEVDRILRPEGYLIIRDNVETISEIENMAKSLHWEIRLTYSKDGEGLLCVQKTFWRPTKVETIVSAIA*	838

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr1g0753	837	Gene3D	Vaccinia Virus protein VP39	404	560	IPR029063	-
	Apr1g0753	837	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	338	590	IPR029063	-
	Apr1g0753	837	MobiDBLite	consensus disorder prediction	69	169	-	-
	Apr1g0753	837	MobiDBLite	consensus disorder prediction	188	234	-	-
	Apr1g0753	837	CDD	AdoMet_MTases	433	528	-	-
	Apr1g0753	837	PANTHER	METHYLTRANSFERASE PMT25-RELATED	3	834	-	-
	Apr1g0753	837	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	315	817	IPR004159	GO:0008168
	Apr1g0753	837	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	3	834	IPR004159	GO:0008168
	Apr1g0753	837	MobiDBLite	consensus disorder prediction	61	254	-	-
	Apr1g0753	837	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	675	805	IPR029063	-
	Apr1g0753	837	MobiDBLite	consensus disorder prediction	268	285	-	-
	Apr1g0753	837	MobiDBLite	consensus disorder prediction	268	295	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr1g0753	Apr-Chr1	8986612	8992933	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr1g0753	-		-	gmx:100793395	1452.57