Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0751 ATGGCTAACAATGCAGCTGCGTGTGCTGAGAGAGCAACTAGTGACATGCTCATTGGTCCGGACTGGGCAATCAACATAGAGTTGTGTGATATCATTAATATGGATCCTGGGCAAGCAAAGGATGCATTAAAGATACTTAAAAAGCGTTTGGGCAGTAAAAATCCAAAAATACAGCTTCTGGCTCTTTTTGTACTGGAGACCCTTAGTAAAAATTGTGGTGAAAGTGTATTTCAGCAGATCGTGGAGCGGGACATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCAGACTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAAGAAGCTTTTGGGGGCCCAACTGGAGTTTATCCTCAATACTATGCAGCGTATAATGAATTAAAGTCTGCTGGAGTTGAATTTCCGCCACGAGATGAGAATAGTGTGCCATTCTTCACTCCTCCTCAAACTCAGCCAATTGTTCATTCTGCTGAAGAATATGATGATGCTAGTGCTACTATTCAGGCTTCTCTTCAGTCAGATGTATCTGGTCTTAGTTTGCCAGAGATACAAAATGCTCAAGGACTAGCTGATGTATTGATGGAAATGCTTAGTGCCTTGAATCCTAAAGATCCTGAGGGTGTCAAGGAGGAAGTAATTATTGACCTTGTTGACCAGTGCCGGTCATACCAAAAGCGTGTCATGCTTCTTGTGAACAATACTTCGGATGAGCAGCTTTTAAGTCAGGGATTGGCACTGAATGACAGCCTTCAGCGAGTACTTCGTCGACATGATGATATTGTGAAAGGAACCACTGATTCAGGTGCAAGGGAAGTGGAAACTTCAGTTCTGCCACTTGTAAATGTAAACCACGAAGATGATGAGTCAGAAGATGATTTTGCTCAACTAGCCCATAGGTCATCACGTGATACACATGCACAGAATCGGAAACCAGCCTATGACAAGGCAGAACCAGCAAGGATAAACCCACTTATTCCCCCACCACCAGCATCAAGGAGGCCAGTCTACTCTGGCACTGACATGGTTGACTATCTTAGTGGTGATGCATATAGGGCAGAAGGATCCCCTGATAAAGAACCTGCTTCATTTGCAGCACCCGTTCATTCTAGCTCTAATTCTACCTCATCAACTATTCCCACACAGTCTTCGTCCCATCCTCATGGCATGAGTACCTCACCACCAAATTTTAGCAGACAACCAGTGTATGATGAACCTTCTTCAATTGACAAATCTTCTGAGCGTCAGCCTCCAGCCCCGTGGGACACACAATCGCCTGCCATACTTCCGCCACCACCTTCTAAGTATAACCAGAGGCAACAATTTTTTGAGCAACAAGGTGTAACTCACCCAAGTAGTGGATCCAGTCCCACTTATGACAACTTGGCGGGACAAACACAAAATCTTTCTCTGAATTCATCCAGCCCAACCAATCAACAGAAGCCAGAAGATGCACTTTTCAAAGATCTTGTTGATTTTGCAAAATCTAAAACCTCATCATCTTCCAAACCCAATAGGTCATATTGA 1542 0.4345 MANNAAACAERATSDMLIGPDWAINIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIVERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGPTGVYPQYYAAYNELKSAGVEFPPRDENSVPFFTPPQTQPIVHSAEEYDDASATIQASLQSDVSGLSLPEIQNAQGLADVLMEMLSALNPKDPEGVKEEVIIDLVDQCRSYQKRVMLLVNNTSDEQLLSQGLALNDSLQRVLRRHDDIVKGTTDSGAREVETSVLPLVNVNHEDDESEDDFAQLAHRSSRDTHAQNRKPAYDKAEPARINPLIPPPPASRRPVYSGTDMVDYLSGDAYRAEGSPDKEPASFAAPVHSSSNSTSSTIPTQSSSHPHGMSTSPPNFSRQPVYDEPSSIDKSSERQPPAPWDTQSPAILPPPPSKYNQRQQFFEQQGVTHPSSGSSPTYDNLAGQTQNLSLNSSSPTNQQKPEDALFKDLVDFAKSKTSSSSKPNRSY* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0751 513 Gene3D - 182 275 IPR038425 -
Apr1g0751 513 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Apr1g0751 513 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Apr1g0751 513 Gene3D - 2 158 IPR008942 -
Apr1g0751 513 PANTHER TOM1-LIKE PROTEIN 4 1 512 - -
Apr1g0751 513 CDD VHS 10 135 - -
Apr1g0751 513 MobiDBLite consensus disorder prediction 297 322 - -
Apr1g0751 513 CDD GAT_GGA_like_plant 188 266 - -
Apr1g0751 513 PANTHER TOM1-LIKE PROTEIN 1 512 IPR044836 GO:0035091|GO:0043130|GO:0043328
Apr1g0751 513 MobiDBLite consensus disorder prediction 371 425 - -
Apr1g0751 513 Pfam VHS domain 9 134 IPR002014 GO:0035091|GO:0043130
Apr1g0751 513 Pfam GAT domain 195 269 IPR004152 GO:0035091|GO:0043130
Apr1g0751 513 MobiDBLite consensus disorder prediction 290 490 - -
Apr1g0751 513 MobiDBLite consensus disorder prediction 439 487 - -
Apr1g0751 513 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Apr1g0751 513 SUPERFAMILY GAT-like domain 140 269 - -
Apr1g0751 513 PIRSF TOM1 1 512 IPR014645 -
Apr1g0751 513 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0751 Apr-Chr1 8970729 8977398 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0751 - - gmx:100792343 840.491