Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0745 ATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGAATGAACCCTCCAAGGGTCTCTGTGGACAACTCTAGCTGTCATGATTGTACACTAATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTAGTGCAAATCTTGACAGATCTTGACTTCATAATTACCAAGGCTTACATATCTTCTGATGGGGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATCGACTTCATTGAAAAGGCTCTAGGACCAAAGGGCCAGAGCACAGAAGGGGTGAAAAATTGGCCAAGCAAAAGGGTTGGAGTGCATTCTGTTGGTGATCATACAGCCGTAGAGCTTATAGGCAGAGACCGTCCAGGTCTCTTATCTGAGATCTCAGCTGTCCTTGCCAACCTCCATTTTAACGTGGTTGCAGCAGAAGTTTGGACTCACAACAGGCGAATAGCCTGCGTCCTTTATGTCAACGATGCCACGAACCGAGCTGTGGATGATCCTAACAGATTATCTCTTATGGAGGAGCAGCTCAACAACATCTTACGTGGATGTGAAGATGATGAGAAAGTTGCTAGGACCAGTTTCTCCATGGGTTTCACCCACATGGATAGGAGGCTTCACCAAATGTTGTTTGCTGATAGAGATTATGAAAGTTCTGGAGTCACAACAGATGTTGATTGTCCCCCCTCTTTCAGGCCAAAAATCACAATAGAACGTTGTGAGGAAAAAGGGTACTCAGTGGTTAGTGTCAGGTGCAAGGACCGAGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGACATGCAATATGTTGTTTTCCATGCCACAATCTCTTCAGATGGCCCTTATGCATCCCAGGAGTACTTTATTCGACACATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATAAAATGCATTGAAGCTGCTATTCGCAGAAGAGTAAGCGAGGGAGTGAGCCTTGAGCTGTGTGCAAAGGACAGGGTGGGTTTGCTGTCAGAAGTAACAAGGATTCTAAGAGAGAATGGTTTGACAGTATGTAGAGCAGGTGTATCAACAAGAGGGGAGCAAGCACTGAATGTGTTCTATGTGAGGGATGCATCAGGGAACCCAGTAGACATGAAAACTATTGAAGCACTTCGTAAAGAAATAGGTAAGACAATGATGGTTGATGTGAAGAGAGTGCCAAGCAATGCCAAAGCACCAGAGAATCGAGGATGGGCCAAAACAAGCTTCTTCTTTGGGAACTTGTTGGAAAGGTTCTTGACTTGA 1341 0.4415 MATVCWPYFDPEYENFSNRMNPPRVSVDNSSCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKGQSTEGVKNWPSKRVGVHSVGDHTAVELIGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVLYVNDATNRAVDDPNRLSLMEEQLNNILRGCEDDEKVARTSFSMGFTHMDRRLHQMLFADRDYESSGVTTDVDCPPSFRPKITIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTIEALRKEIGKTMMVDVKRVPSNAKAPENRGWAKTSFFFGNLLERFLT* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0745 446 CDD ACT_ACR_4 341 412 - -
Apr1g0745 446 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Apr1g0745 446 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Apr1g0745 446 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 446 - -
Apr1g0745 446 Gene3D - 128 210 - -
Apr1g0745 446 CDD ACT_ACR_2 129 201 - -
Apr1g0745 446 SUPERFAMILY ACT-like 125 201 IPR045865 -
Apr1g0745 446 SUPERFAMILY ACT-like 32 106 IPR045865 -
Apr1g0745 446 Gene3D - 338 419 - -
Apr1g0745 446 Pfam ACT domain 37 85 IPR002912 -
Apr1g0745 446 Pfam ACT domain 130 199 IPR002912 -
Apr1g0745 446 CDD ACT_ACR_1 35 106 - -
Apr1g0745 446 CDD ACT_ACR_3 263 337 - -
Apr1g0745 446 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Apr1g0745 446 SUPERFAMILY ACT-like 339 410 IPR045865 -
Apr1g0745 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 446 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0745 Apr-Chr1 8878856 8886554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0745 - - gmx:100789173 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0749 9 13316734 13321644 Apr1g0745 1 8878856 8886554 PCT