Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0733 ATGGATGTTGCACATTTTTTGTTTGGAATATTTGGGAATGCTTCCGCTCTGTTCCTCTTCTTGGCTCCGGTGATCACATTCAAGCGGATAATAAAGAACAGATCCACACAGAAGTTCTCGGGAATTCCATATGTTATGACACTGCTTAATTGTCTCCTTTCTGCTTGGTATGGTCTACCTTTTGTGTCTCCCCACAACATATTAGTGTCAACAGTGAATGGCGCCGGAGCATTAATTGAAACCATATATGTTTTGATCTTCATCGTTTTGGCACCCAGGAAGGGGAAGGCTAAAATTCTTGGGATCTTCACCTTTGTGCTTTCTGTGTTTGCTGCTGTTGTTTTTGTGTCCCTTTTTGCCCTGCATGGCACTTCCAGAAAGCTCTTCTGTGGCTTCGCTGCCGCCATATTTTCCATAATCATGTATGGTTCGCCACTCTCAATTATGAGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCTTTCTTCTTGTCGCTGTTTGTGTTTCTCTGCGGCACTTCCTGGTTTATCTTTGGTCTGCTAGGCCGGGACCCATTTGTTGCAGTACCTAATGGTATTGGTTCTGCTTTGGGGACAATGCAACTAATATTGTATTTCATATACCGAGACAAGAAAGGTGTTCCAAAAGAGGAGGAATCCATAGAGATGGGTGACACAAAACCCCATCAAGGGAAGCAATCCAATGGAAATGCTACTCAAGTATGA 729 0.4321 MDVAHFLFGIFGNASALFLFLAPVITFKRIIKNRSTQKFSGIPYVMTLLNCLLSAWYGLPFVSPHNILVSTVNGAGALIETIYVLIFIVLAPRKGKAKILGIFTFVLSVFAAVVFVSLFALHGTSRKLFCGFAAAIFSIIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFVAVPNGIGSALGTMQLILYFIYRDKKGVPKEEESIEMGDTKPHQGKQSNGNATQV* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0733 242 PANTHER RAG1-ACTIVATING PROTEIN 1 4 228 - -
Apr1g0733 242 Gene3D - 126 222 - -
Apr1g0733 242 MobiDBLite consensus disorder prediction 228 242 - -
Apr1g0733 242 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Apr1g0733 242 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016021
Apr1g0733 242 MobiDBLite consensus disorder prediction 219 242 - -
Apr1g0733 242 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 228 IPR018180 GO:0051119
Apr1g0733 242 Gene3D - 9 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0733 Apr-Chr1 8729724 8732491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0733 1 190 Miscellaneous Gene Families AT1G21460 77.895 2.14e-106 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0733 K15382 - gmx:100800304 424.091