Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0728 ATGGATGTATGGGATAGTTGGTGGGTTTTGCAAGTTATGCAGTTGCTGGGTTTGTTTAGTTTTTGGATTTCGTTTGCAAAGTTTAGAACTTTACTCTCAAGGGCCTTTGGTTTTGGTCACAAAATAATTAAGGGTGACTGCAATGCATGGATCTTTGTTTCCTTCAATGGGTTGGTCACAGCTGGTTCTTTGATATCCTTGCTCTTGATCCTTTCCTGGGCTTATTCATATGCATTTCCCAGTTCTCCCTCAGTGATTAAGAGTTATGACATTCCCAACAGTTCTCATTCACTTGTTCAGAGTTTTCAGATTCTAAAATCAAATGTTTCAAGGGGCACCTGCAATGTGTTTGAAGGAAGTTGGGTAAAGGATGATAGCTACCCTTTGTATGATGCTTCTCATTGCCCTTTTGCTGAAAGGGGTTTTAATTGCCTTGCTAATGGGCGTAAAGACAGAGGTTATACAAAATGGAGGTGGAAACCAAAGAATTGTGATATTCCAAGGTTTGATGCCCGTAAAATACTCGAAGAACTTCGTGGGAAAAGGGTGGTTTTTGTTGGGGATTCATTGAGTAGGACCCAATGGGAGTCCATGATATGTATGCTAATGACAGGAGTTGAGGATAAGAAGAGTGTCTATGAAATCAAAGGCAACAAGATCACCAAACAGATAAGATTTTTAGGTGTAAAGTTTAGTTCTTTTGATGTTAGAATTGACTTTTATCGATCGGTGTTCTTGGTGAAGCCTGGTTCTGTGCCCAGACATGCACCCCAGAGGGTGAAGACAACACTGAGATTGGACAAGATCGATGATATTAGTCATGAGTGGATTGACTCTGATGTTCTGATATTCAATTCAGGTCACTGGTGGACACGGACTAAACTTTTTGACATGGGCTGGTATTTTCAGGTTGGTAGCTCAGTGAAGCTTGGAATGCCAATTAATTCTGCTTTCAACACAGCTTTGCTCACCTGGGCGTCTTGGGTGGAGAATACCATTAACACAAACAGGACAAGAATATTCTTTCGCACCTTTGAATCCTCTCATTGGAGTGGACAGAACCATAATGCGTGCAAAGTGACTCGAAAGCCTTGGAAGAGAACTAATGGGAGGGAGAAAAGCCCAATTTCAGATATGATAAACAGAGTTGTAAAAAACATGAGTGCACAGGTAACAGTTCTGCACGTTACACCAATGACTGCATATAGAAGTGATGGGCATGTGGGCACTTGGAATGACAAGCCTTCTGTGCCTGATTGTAGCCATTGGTGTTTACCAGGTGTTCCTGATATGTGGAACCAAATTCTTCTCTCATATTTCCTTCCAAAACAAGGACCAAATTAG 1344 0.4137 MDVWDSWWVLQVMQLLGLFSFWISFAKFRTLLSRAFGFGHKIIKGDCNAWIFVSFNGLVTAGSLISLLLILSWAYSYAFPSSPSVIKSYDIPNSSHSLVQSFQILKSNVSRGTCNVFEGSWVKDDSYPLYDASHCPFAERGFNCLANGRKDRGYTKWRWKPKNCDIPRFDARKILEELRGKRVVFVGDSLSRTQWESMICMLMTGVEDKKSVYEIKGNKITKQIRFLGVKFSSFDVRIDFYRSVFLVKPGSVPRHAPQRVKTTLRLDKIDDISHEWIDSDVLIFNSGHWWTRTKLFDMGWYFQVGSSVKLGMPINSAFNTALLTWASWVENTINTNRTRIFFRTFESSHWSGQNHNACKVTRKPWKRTNGREKSPISDMINRVVKNMSAQVTVLHVTPMTAYRSDGHVGTWNDKPSVPDCSHWCLPGVPDMWNQILLSYFLPKQGPN* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0728 447 Pfam PMR5 N terminal Domain 113 165 IPR025846 -
Apr1g0728 447 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 166 438 IPR026057 GO:0016740
Apr1g0728 447 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 48 441 IPR029962 GO:0016413
Apr1g0728 447 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 48 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0728 Apr-Chr1 8683072 8686345 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0728 - - gmx:100802445 823.928