Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0707 ATGGCAGATTCAGAGCGAATCCAAAATCCGTGGATGGCTTCGGAGCAGACTGCAGTTGAAATGAATGACAACGGTACGGATTCTACGCGACGCTTTTCTCCTCCTCCTCCGCCGCAACCATCCAATAGCGATCAATTGGGAATCGGAGAACGAGCTTTCTCCGCCGCCGGCGCTGCCTTCCTCTCCGCCATCATTGTCAATCCCCTCGATGTTGCCAAGACAAGGTTGCAAGCACAGGCCGCAGGGGTTGCATATTCTCATCCGCTCAGTAATATGACCAGTCGTATGTCTTATTTTGGGCCAAATATGATGTTTGCTGATCTAAGATGTTCTCCTTCATGTCACCGGGCTGGAATCCAAGGCACAGTATCAATTTGTCCTCCTGAGTGTTTTCGCTACAAAGGAACACTGGATGTCCTCTACAAAATTATACAACAGGAAGGATTTGCTAGGCTATGGAGAGGCACAAATGCTGGCCTTGCACTTGCAGTACCAACTGTAGGAATTTACCTTCCTTGCTATGACATATTCCGCAATTGGTTTGAGGGATACACGGCCAAAAGTGCACCAACAGCAACCCCATATGTACCTTTAGTGGCTGGTTCATTGGCGCGTTCTCTAGCTTGTGCAACTTGTTATCCTATTGAACTTGCTAGAACTCGTATGCAGGCATTCAAGGAGACTCAAATTGGTAAAAAGCCACCTGGAGTGTTCCAGACTCTCTTGGGTGTTGTCTCACATGTGAAGAGTACAAACACTCCACAGAACAGTTTGCAAGGTTATCGTGTTCTGTGGACTGGCATGGGAGCTCAACTTGCCCGTGATGTTCCTTTCTCTGCAATTTGTTGGTCAACACTTGAACCAACTAGAAGGAAGCTTCTTAGTTTGGTTGGCGATGATGCCAATGTATTGAGTGTTCTTGGGGCAAATTTTGCTGCTGGTTTTGTTGCCGGAACTTTAGCAGCTGGTGCTACATGTCCGCTAGATGTTGCCAAAACTCGAAGGCAGATAGAGAGGGATCCTGTTAGGGCATTGACAATGACTACAAGACAGACACTGATGGAGGTGTGGAGAGACGGAGGTTTGAAAGGGCTTTTCACAGGGTTTGGTCCACGAGTTGGTCGGGCAGGTCCCTCCGTTGGAATTGTGATTTCATTTTATGAAGTTGTAAAGTTTGTTCTACATCATGGGTACGCAGCATCATGA 1206 0.4743 MADSERIQNPWMASEQTAVEMNDNGTDSTRRFSPPPPPQPSNSDQLGIGERAFSAAGAAFLSAIIVNPLDVAKTRLQAQAAGVAYSHPLSNMTSRMSYFGPNMMFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVLYKIIQQEGFARLWRGTNAGLALAVPTVGIYLPCYDIFRNWFEGYTAKSAPTATPYVPLVAGSLARSLACATCYPIELARTRMQAFKETQIGKKPPGVFQTLLGVVSHVKSTNTPQNSLQGYRVLWTGMGAQLARDVPFSAICWSTLEPTRRKLLSLVGDDANVLSVLGANFAAGFVAGTLAAGATCPLDVAKTRRQIERDPVRALTMTTRQTLMEVWRDGGLKGLFTGFGPRVGRAGPSVGIVISFYEVVKFVLHHGYAAS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0707 401 Pfam Mitochondrial carrier protein 194 293 IPR018108 -
Apr1g0707 401 Pfam Mitochondrial carrier protein 46 182 IPR018108 -
Apr1g0707 401 Pfam Mitochondrial carrier protein 309 395 IPR018108 -
Apr1g0707 401 PANTHER FI19922P1-RELATED 40 401 IPR045315 GO:1990542
Apr1g0707 401 PANTHER BNACNNG35730D PROTEIN 40 401 - -
Apr1g0707 401 MobiDBLite consensus disorder prediction 1 47 - -
Apr1g0707 401 SUPERFAMILY Mitochondrial carrier 49 389 IPR023395 -
Apr1g0707 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 292 IPR018108 -
Apr1g0707 401 Gene3D Mitochondrial carrier domain 116 399 IPR023395 -
Apr1g0707 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 46 180 IPR018108 -
Apr1g0707 401 MobiDBLite consensus disorder prediction 9 30 - -
Apr1g0707 401 Gene3D Mitochondrial carrier domain 25 99 IPR023395 -
Apr1g0707 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 305 393 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0707 Apr-Chr1 8447329 8452387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0707 142 392 Organic Solute Cotransporters AT3G55640 27.626 2.29e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0707 K15119 - gmx:100778501 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0707 1 8447329 8452387 Apr1g0707 1 8447329 8452387 ECH