Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0678 ATGCCGCGCAGTTCGAAGCACAAATCGAGCAAGCACAGTTCGAGGGATGCGAGGGAGCACTCCGACTCCGAGAGGGATTCCGGCTTGAAGGATCGGAAGAGCAAGGAGGAGAGCAGCGCCGCCGCCAAGGCATCCAAGGATTCGAGTTCTGCCGAGAAGCGGAGGCTCGATTCGAAGGACGCGCACGGTAACGGAGAGTATTCCGACGAGTATGCTTCGTCCTCGAAGCGCCGCAAGGACGGTGGAGGAGATAGGTGGAATGGCGGCGAGGAAGGGTCGAAGAAGTCGAAGGCAGTGGGGGATTCAAAGAGTAGGAGGAGGGATGGGAGTGTGGGAGTGTACGGTGAGGGTGAGGAGGTGAAGAGGAGTAGCAGTAAGGGCGATGGGAAGCATAGGGATTCGTCGTCGGGTCGAAAGGAGAATAGAGAAGGTGGGGCGGAGAAGGAGAAGGAAAGGAAATTTAAAGAAGGTAGAAGTGAGGAATCGGTTGATGACCAAGAACAGCGTGTGTCCAAGCAAGTGTTTGAAATTAATGATTCAAAGAAATCTGATGAATTGCGAAGCCCTGAACCTGATAACCAGCTTGAGAAACGAATGAGGAAGAAGAGGGATGACTATAGTGATGGTGATAAGCATCAAGATAATACTGGAGATGGTTATGATAGACATTTGTCTTCTAGGGATGACATTGCCAGGGATGGGAGAAAGAAGGATGATAGGCGAAAAGAGGAGAAATATAAAGACAAGTATAGGGATGAATTAGACAGGGAGAATAAACATCGACATGACAAGCAACGTGATGAGCGCCCTGCAAAAGATCATACAAGCATAAGGTCTGATGATAAACATGCTAGGGAAGAAAAGAATAGTCTAGAATCACGACAGAAGAGAACCAAGCTTCCAGAGAGTGACAGGGACCATAATCGTGATCGTGATGGGGATCGTGATTTGGAATCTGTTCGTGATCGTGATTTGGAATCTGTTCGTGATCGTGAACGCCATACTGAACGTGATCGTGATTATGATCTTGACAGGGATCATGATTATGATAGAGATAGAGATCGAGATTGGGACTGGGATCGTGATCGAGATCATTATCGTGACCGAGACAGAGAGCGTGACCGTCGCCGTGATCGTGATGGGTCATATGTGGATGATAGAAGTGCTAGAGGCAAAGAGGGTGTGACAAAGAAACGAATTTTGGATGATCGTGATGATTATAGTGACTCTAAATCTAGGGGTGTTAAGAGCTATTATCCTGATACAGAGAAGAGGAGTTTGAGCAGCATCAGAGCTGATTCAGATGTCGACAGAGGAAAATCTCAACCACGACAAGCTCATGCTGATTCAACTGGGACTAGCAATAAACACCGATCTTCTCCTGCCTCAAATACACATGCTGGCAAAGAGGAATATAGAAATGCAAACGCTGAAGATCCAAAGTACAAAGACTCATTGGTAGAACAGAGGACCAAAGGTTCAAGAGAGGGTTACTCTGGGATATCAGATAGAGGTCCTAAATACAAATCAATTGAAAAACCTAATAAAATAGATGAGTGTCCAGCAGGAGACTTGTCAAATGAAAAGTCTTCCAGTGCCAAGGCTTCACCCGTGGGCCTGATGGAAAGATCTCCTTCATCAACAAGCATGGAGCGCAGGTATGTGAGTAGAAGTGGTGTTAAGAGGAATCTTGAAATTGATGAAAGTGGAAGGAGGAGCAATACTGATGCAAGAGATTTCTCTGCTTCTGATGACAGACTTGGCCGGGAGTCAACTCTAGAGAAACCACTATTGGATGAGCCCTCTCAAGCAGATTCCTCTTTTTATGGTAGGACTAATCAGAGCAATGCATCATTGATTCCTCCCCCACCTGGTTTCAGGGCAGTCTTAGATAGACCTTATATGGGTTCTTTAGATGATGATGTTAGAGATAACTCTAATACACGATACAGAAGAAGTAGTGAACCTGGCTTTGGAAGAGGTCATGCTGGCAATTCCTGGAGGGCAGTTCCAAACTGGAATTCACCAGTACCAAATGGATTTGTTCCCTTCCCACCTGGGCCAGCTCATGGAGGTTTTCAAACAATGATGCCACAGTTTACATCTCAACCTCTCTTTGGTGTTAGGCCTCCAATGGAAGTTAACCATGCTGGCATTCCTTACCATATTGCTGATGCTGACAGGTTTCCAGGTCACTTGCGTCCACTTGGGTGGCCAAATATGATGGATGGAACTGGACCTGCTCATTTGCATGGATGGGATAGCAATAATGGTGTCTTCAGAGATGATCCTCACATGTATGGTAGTTCTGATTGGGACAGGAACAGGCATTCAACAAATAATCATGGATGGGAATCTGGTTCAGAGACTTGGAAAGAACAGAATTCTGATTCAAAGAAGGAATTGCGTTCCCCAGCCTGTAAAGAAGAGTCAGTTCCTGCCTTGGCTGATAATGGCTTGACTGATCAGACTAGTCAGATGTCTCATGATGAACATAACCGGGATGACCTTCATGACAAATCTCCTGAAACAAAGTTGTCCAGTTTCAGTTCTCCAGCAGAAATTCCATTGAACTCTTCATCCTCAACTATTCTTGAAAAGGTGCCTGATACTTCAACACCAAGTGACAATACTTCTCTTTTCAGCCGTTTCTACCTTTCCAAACTTGACATTTCAGTAGACTTAGTACTGCCAGAGTTGTATGACCAGTGTATGTGTACTCTGAATGTTGACAAGAATGCTTCCGTCAATGCAGTTGCTGGTACAGAACTATTCTTGAAGGGGTCCCTGACAATCAAATTTCCCCATCCTGTGATTTTACAGAATGGTTCAAGAGCTCGGCAGAAATATGCTGCCACCTTGTCAAAGCATTCAGCATTTCCAGCAATTGATAATTCTATCTTCCAGAGAGCCATAGCCCTTTACAAGAAACATAGGGTGAAACTGCCTAAAAAGGAGGAGCTGGATAGTATTGCAGCACCCAGCCAGATGCAAGTGGATGAGTCTGTTCCTATTCCTAGTTTGGAGAATGGACACGTCCCTGTCTCAGCTTTCAATGAGATAAATGATGTGCTAATACCTTCATTAGAACCAAACAAAGTGGAAAGTACATCCCCTGTGAAGGAGCAATTGGAAGAAAACAATCAAAACTACAGCCAGATGGTGCAAGATCATGATTGTACCCATTCTTTTAAAACAGGCATATCTAGTCCATCTTCTGGACAAATGAACCAAGAGGCAGCTGTAGCAGGTTTGCAAGAGAAAGAGGACTACGTTACTTCTGATAAGATGAATTCAGGGGATGCAGAGGAGGATAACTCCATGGCATCCAAAACTGAAGCTCAGTTGGCCCCCACTTTGTATGAAGATGGTGATAACATTAATAGCAAAGCCAAAACTACTGGTTTTGCCCATTGTGCAGATGAAAAGCTGGGTTTTGGTGACACACAGGTTAATCCCTTAGTTGTTGAGGATGGGTCTCCCAAAGCTTGTGATGCTTTGATGCCTGGTTCAAATGAGTCTGAGTCGCTAATTTTAAGCCGGATACATCATTCTCCTGAAAGTACACATTGA 3573 0.45 MPRSSKHKSSKHSSRDAREHSDSERDSGLKDRKSKEESSAAAKASKDSSSAEKRRLDSKDAHGNGEYSDEYASSSKRRKDGGGDRWNGGEEGSKKSKAVGDSKSRRRDGSVGVYGEGEEVKRSSSKGDGKHRDSSSGRKENREGGAEKEKERKFKEGRSEESVDDQEQRVSKQVFEINDSKKSDELRSPEPDNQLEKRMRKKRDDYSDGDKHQDNTGDGYDRHLSSRDDIARDGRKKDDRRKEEKYKDKYRDELDRENKHRHDKQRDERPAKDHTSIRSDDKHAREEKNSLESRQKRTKLPESDRDHNRDRDGDRDLESVRDRDLESVRDRERHTERDRDYDLDRDHDYDRDRDRDWDWDRDRDHYRDRDRERDRRRDRDGSYVDDRSARGKEGVTKKRILDDRDDYSDSKSRGVKSYYPDTEKRSLSSIRADSDVDRGKSQPRQAHADSTGTSNKHRSSPASNTHAGKEEYRNANAEDPKYKDSLVEQRTKGSREGYSGISDRGPKYKSIEKPNKIDECPAGDLSNEKSSSAKASPVGLMERSPSSTSMERRYVSRSGVKRNLEIDESGRRSNTDARDFSASDDRLGRESTLEKPLLDEPSQADSSFYGRTNQSNASLIPPPPGFRAVLDRPYMGSLDDDVRDNSNTRYRRSSEPGFGRGHAGNSWRAVPNWNSPVPNGFVPFPPGPAHGGFQTMMPQFTSQPLFGVRPPMEVNHAGIPYHIADADRFPGHLRPLGWPNMMDGTGPAHLHGWDSNNGVFRDDPHMYGSSDWDRNRHSTNNHGWESGSETWKEQNSDSKKELRSPACKEESVPALADNGLTDQTSQMSHDEHNRDDLHDKSPETKLSSFSSPAEIPLNSSSSTILEKVPDTSTPSDNTSLFSRFYLSKLDISVDLVLPELYDQCMCTLNVDKNASVNAVAGTELFLKGSLTIKFPHPVILQNGSRARQKYAATLSKHSAFPAIDNSIFQRAIALYKKHRVKLPKKEELDSIAAPSQMQVDESVPIPSLENGHVPVSAFNEINDVLIPSLEPNKVESTSPVKEQLEENNQNYSQMVQDHDCTHSFKTGISSPSSGQMNQEAAVAGLQEKEDYVTSDKMNSGDAEEDNSMASKTEAQLAPTLYEDGDNINSKAKTTGFAHCADEKLGFGDTQVNPLVVEDGSPKACDALMPGSNESESLILSRIHHSPESTH* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0678 1190 MobiDBLite consensus disorder prediction 605 620 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 844 872 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 12 444 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 445 470 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 638 663 - -
Apr1g0678 1190 Coils Coil 247 267 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 1 624 - -
Apr1g0678 1190 PANTHER LOW PROTEIN: ZINC FINGER CCCH DOMAIN PROTEIN 1 1190 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 827 843 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 506 523 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 792 807 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 471 491 - -
Apr1g0678 1190 Coils Coil 1041 1061 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 768 872 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 1170 1190 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 1173 1190 - -
Apr1g0678 1190 MobiDBLite consensus disorder prediction 555 596 - -
Apr1g0678 1190 PANTHER OS05G0595500 PROTEIN 1 1190 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0678 K22909 - gmx:100814864 1761.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0678 1 8113415 8122739 Apr1g0678 1 8113415 8122739 ECH