Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0674 ATGGCCATTATCTCCGATTTCCATGAAGAACAACCCGAACAATCCCAATCCTCTTCGTCTTCGTCTTCGTTCACTTCCAGTTTCGACCCATCCAATCCCGTAGCTTTTCTTGAGCGAGTCTTCGAATTCATCTCCCGAGAGAGTGACTTTCTGTCGTCGGAGACCGCCGAGAAGGATATAGCGTCGCTGGTGCGCGCAGCCGGGAAGAAGAAGAGAGACGAGCTTAAGGCCACTGAGGAGAGGGAAAAGGCCCAGAAGAGGTTGAAGGAAGAGAAGGAACTCAAGGTGGAGGAGGCTAACAGAGAGGAAAGTGGCTCCATAGTTCCAAACAAAGGTAATGGTCTGGATTTGGATAAATATTCTTGGACTCAGACTCTTCAGGAGGTCAACGTAAATGTTCCAGTTCCAAATGGAACCAAATCAAGGTTTGTCATCTGTGAAATAAAGAAGAACCATCTAAAAGTTGGACTAAAGGGGCAACCGCCAATTATTGAGGGGGAGTTGCACCGACCTGTCAAGCCTGATGACTGTTATTGGAGCATAGAGGATCAGAGTGCAATTTCTATTCTTTTGACCAAGCATGATCAGATGGAATGGTGGAAATGTCTGGTAAAAGGTGATCCCCAAATTGATACTCAAAAGGTTGAACCAGAGAACAGCAAACTTTCTGACCTGGATCCTGAGACTCGACAGACTGTTGAAAAAATGATGTTTGATCAGAGGCAGAAATCTATGGGCCTTCCTACCAGTGATGAGCTTCAGAAGCAGGAAATTATGAAGAAATTTATGGCGGAGCATCCGGAGATGGACTTCACGAGAGCAAAAATATCATAA 834 0.4556 MAIISDFHEEQPEQSQSSSSSSSFTSSFDPSNPVAFLERVFEFISRESDFLSSETAEKDIASLVRAAGKKKRDELKATEEREKAQKRLKEEKELKVEEANREESGSIVPNKGNGLDLDKYSWTQTLQEVNVNVPVPNGTKSRFVICEIKKNHLKVGLKGQPPIIEGELHRPVKPDDCYWSIEDQSAISILLTKHDQMEWWKCLVKGDPQIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDELQKQEIMKKFMAEHPEMDFTRAKIS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0674 277 SUPERFAMILY HSP20-like chaperones 102 219 IPR008978 -
Apr1g0674 277 ProSiteProfiles CS domain profile. 115 204 IPR007052 -
Apr1g0674 277 MobiDBLite consensus disorder prediction 1 30 - -
Apr1g0674 277 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 1 87 IPR037898 -
Apr1g0674 277 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 70 275 IPR037898 -
Apr1g0674 277 CDD p23_NUDC_like 120 204 - -
Apr1g0674 277 MobiDBLite consensus disorder prediction 66 104 - -
Apr1g0674 277 Pfam CS domain 119 193 IPR007052 -
Apr1g0674 277 Coils Coil 72 102 - -
Apr1g0674 277 MobiDBLite consensus disorder prediction 9 30 - -
Apr1g0674 277 PANTHER PROTEIN BOBBER 2 70 275 - -
Apr1g0674 277 PANTHER PROTEIN BOBBER 2 1 87 - -
Apr1g0674 277 MobiDBLite consensus disorder prediction 66 112 - -
Apr1g0674 277 Gene3D - 111 238 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0674 Apr-Chr1 8041527 8044703 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0674 K25866 - gmx:100775670 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0674 1 8041527 8044703 Apr1g0674 1 8041527 8044703 ECH