Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0661 ATGGAGTCTCTGCAACTTGTTCCTCTTCTTCTGCGTCCTCTTACGTCATCATCACCACCGCCAACTCAGCATCGCTACCATTCACCGTTAATAAGGCAACTCTGTTTCCCTTCTTTCCTCAAAAGAACAACAAAAAACGCCATCCTACGATCATTTCCCGGCGACACTCAAGGCGGTGCCGCCGCTTCACCAGACGGTCCCTTCGCCTTCGACGATGAAGTCTCTCACCACAAAGAAGAAAGAGCTCTCGTGTTATCCAGAGAAATCGATGCTTTTGGCTATCTTGTTGGCTTTCGCTTGATTCCTGAGTCTGGGAATGTGAGTGAAGAAGCTTCTAGTAGCGATGAAGTTGAAGAACCTGTGGTTGAGGATATAGAAGAGGAGAAAGCTCAGACTAGAGTCTCCTACAACATTGTTTTTGTGACTGCTGAAGCTGCACCGTATTCGAAGACTGGTGGCCTTGCTGATGTTTGTGGCTCTTTGCCAATAGCACTGGCAGCTCGTGGACACCGTGTGATGGTTGTCTCGCCTAGATATATTCATGGTACTTCTGAGGATGATAAGTTATCTGATGCAGTTGATCTTGATCGGATCAAAGTGTATTGCTTTGGGGGTGCTCAAGAAGTTGGGTTTTTCCATGAATATAGGCAAGGTGTTGATTGGGTATTTGTGGATCACCCCTCTTACCATAGACCAGGGAATCCATATGGAGACAAGTATGGGACTTTTGGGGATAATCAGTTTCGGTTCACTTTACTTTGCCATGCAGCATGTGAAGCTCCACTGGTGCTATCATTGGGAGGGTTCAGTTATGGGGAAAATTGTTTATTCCTTGTTAATGATTGGCATGCCAGCCTAGTTCCGGTACTTTTGGCAGCAAAGTATCGTCCGCATGGGGTATATAAGGATGCTCGTAGTATATTAGTGATACATAATATAGCACATCAGGGAGTGGAGCCTGCAATTACATATAGTAATTTGGGGCTGCCTCCAGAATGGCGGGGAGCACTGGAATGGGTGTTCCCTACGTGGGCAAGGATGCATGCTCTTGACACAGGTGAAGCTGTCAACTTTCTAAAAGGTGCCATTGTTACAGCTGACCGGATAGTAGCAGTAAGCAAGGGCTATTCCTGGGAGATAACAACTACTGAAGGTGGACATGGTCTACATGAGTTATTAAGTAGTCGAAGAAGTATTCTCACTGGAATCACAAATGGAATTGATGTCACTGAATGGGATCCATCATCCGATGAACATATTGCTTGCAACTATTCCGCTGATGACCTTTCGGGGAAGGCCAAATGCAAAATTTCCTTGCAGAAGGAATTGGGTCTTCCAGTGAGGCCTGATTGTCCATTGATTGGATTCATTGGAAGACTAGACTACCAGAAAGGTATTGACCTGATTCGCTTGGCAATTCCAGAACTCATTGAAGATGATGTTCAGTTTGTAATGCTTGGTTCAGGAAACCCTATTTATGAAGATTGGATGAGAGAAACAGAGTCAGCGTATAGAAATAAATTTCGGGGTTGGGTGGGATTTAATGTTCCAATATCTCATAAAATAACTGCAGGCTGTGATATACTGTTAATGCCATCTGCATTCGAGCCCTGTGGACTGAATCAGTTGTATGCAATGAGATATGGAACTATACCTGTGGTTCATGAAACTGGGGGACTAAGAGATACTGTTCAAAATTTTAATCCATTTGCTGAAGAAGGAGATGGTGAAGGCACTGGGTGGACATTTTCTCCCCTGACGAAGGATAGCATGTTAACGGCTCTAAGATATGCCATTCAAACGTATAATGAATACAAGTCTTCTTGGGAGGGATTGATGATAAGAGGTATGACGAGAGACTACACATGGGTAAATGCTGCCACTCAATACGAGCAAATTATTGAGTGGGCATTCCTCGACCCTCCCTATTGCTGA 1935 0.4455 MESLQLVPLLLRPLTSSSPPPTQHRYHSPLIRQLCFPSFLKRTTKNAILRSFPGDTQGGAAASPDGPFAFDDEVSHHKEERALVLSREIDAFGYLVGFRLIPESGNVSEEASSSDEVEEPVVEDIEEEKAQTRVSYNIVFVTAEAAPYSKTGGLADVCGSLPIALAARGHRVMVVSPRYIHGTSEDDKLSDAVDLDRIKVYCFGGAQEVGFFHEYRQGVDWVFVDHPSYHRPGNPYGDKYGTFGDNQFRFTLLCHAACEAPLVLSLGGFSYGENCLFLVNDWHASLVPVLLAAKYRPHGVYKDARSILVIHNIAHQGVEPAITYSNLGLPPEWRGALEWVFPTWARMHALDTGEAVNFLKGAIVTADRIVAVSKGYSWEITTTEGGHGLHELLSSRRSILTGITNGIDVTEWDPSSDEHIACNYSADDLSGKAKCKISLQKELGLPVRPDCPLIGFIGRLDYQKGIDLIRLAIPELIEDDVQFVMLGSGNPIYEDWMRETESAYRNKFRGWVGFNVPISHKITAGCDILLMPSAFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAEEGDGEGTGWTFSPLTKDSMLTALRYAIQTYNEYKSSWEGLMIRGMTRDYTWVNAATQYEQIIEWAFLDPPYC* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0661 644 MobiDBLite consensus disorder prediction 107 126 - -
Apr1g0661 644 Gene3D Glycogen Phosphorylase B; 156 633 - -
Apr1g0661 644 Gene3D Glycogen Phosphorylase B; 409 620 - -
Apr1g0661 644 Hamap Glycogen synthase [glgA]. 136 637 IPR011835 GO:0004373
Apr1g0661 644 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 81 644 - -
Apr1g0661 644 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 81 644 - -
Apr1g0661 644 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 128 636 - -
Apr1g0661 644 CDD GT5_Glycogen_synthase_DULL1-like 137 636 - -
Apr1g0661 644 Pfam Glycosyl transferases group 1 451 603 IPR001296 GO:0016757
Apr1g0661 644 Pfam Starch synthase catalytic domain 137 394 IPR013534 -
Apr1g0661 644 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 137 634 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0661 Apr-Chr1 7892741 7900744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0661 113 634 Glycosyltransferase AT3G01180 49.434 1.56e-166 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0661 K00703 - gmx:100807354 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0661 1 7892741 7900744 Apr1g0661 1 7892741 7900744 ECH